SearcharxivSearch

arXiv · 1007.5406

Tree structure compression with RePair

Abstract

In this work we introduce a new linear time compression algorithm, called "Re-pair for Trees", which compresses ranked ordered trees using linear straight-line context-free tree grammars. Such grammars generalize straight-line context-free string grammars and allow basic tree operations, like traversal along edges, to be executed without prior decompression. Our algorithm can be considered as a generalization of the "Re-pair" algorithm developed by N. Jesper Larsson and Alistair Moffat in 2000. The latter algorithm is a dictionary-based compression algorithm for strings. We also introduce a succinct coding which is specialized in further compressing the grammars generated by our algorithm. This is accomplished without loosing the ability do directly execute queries on this compressed representation of the input tree. Finally, we compare the grammars and output files generated by a prototype of the Re-pair for Trees algorithm with those of similar compression algorithms. The obtained results show that that our algorithm outperforms its competitors in terms of compression ratio, runtime and memory usage.

Explore related subjects

Keep this discovery

BibTeXRIS

Markus Lohrey, Sebastian Maneth, Roy Mennicke. 2010-07-30. Tree structure compression with RePair. https://arxiv.org/abs/1007.5406

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related papers

Quasi-Monte Carlo Beyond Hardy-Krause II: $(1 + \varepsilon)n$ Samples Suffice

Numerical integration studies how well one can estimate the integral of a function $f$ over $[0,1)^d$ using $n$ sample points. The two classical methods, Monte Carlo (MC) and quasi-Monte Carlo (QMC), have complementary strengths and weaknesses, and a fundamental question is to design an approach that combines the benefits of both. Recently, building on the transference principle in discrepancy theory, Bansal and Jiang~\cite{BJ25a} gave a randomized QMC method that bridges MC and QMC guarantees using only i.i.d.\ samples. Their method also goes beyond the classical Koksma--Hlawka inequality: it achieves integration error $\widetilde{O}_d(\sigma_{\mathsf{SO}}(f)/n)$, where the smoothed-out variation $\sigma_{\mathsf{SO}}(f)$ can be substantially smaller than the Hardy--Krause variation that governs the classical bound. However, their algorithm requires $n^2$ i.i.d.\ samples as input, and this quadratic blowup is inherent to any method based on the transference principle. In this work, we bypass the quadratic blowup: for any constant $\varepsilon > 0$, we show that $(1+\varepsilon)n$ i.i.d.\ samples suffice to both obtain the beyond-Hardy--Krause guarantee of~\cite{BJ25a}, resolving an open problem posed there, and to produce low-discrepancy point sequences. Our algorithms are variants of the online Haar-thinning method of Dwivedi, Feldheim, Gurel-Gurevich, and Ramdas~\cite{DFG+19}.

cs.DS

Single-Exponential Algorithms and a Polynomial Kernel for Strong Connectivity Augmentation

Strong Connectivity Augmentation (SCA) asks whether a directed acyclic graph can be made strongly connected by adding at most $k$ prescribed links whose total weight is within a given budget. Klinkby, Misra, and Saurabh (SODA 2021) gave an $O^*(2^{O(k\log k)})$-time algorithm and asked whether the problem admits a single-exponential parameterized algorithm and a polynomial kernel. We answer both questions affirmatively: SCA can be solved in $O^*(9^k)$ time and admits a polynomial kernel with $O(k^4)$ vertices and $O(k^{16})$ bits. For unweighted SCA, we obtain $O^*(4^k)$ time and a kernel with $O(k^3)$ vertices. Our algorithms are based on a particularly simple reduction to Strongly Connected Spanning Subgraph with two edge costs.

cs.DS