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arXiv · 1106.1356

Hierarchy of protein loop-lock structures: a new server for the decomposition of a protein structure into a set of closed loops

Simon Kogan·Zakharia Frenkel·Oleg Kupervasser·Zeev Volkovich
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Abstract

HoPLLS (Hierarchy of protein loop-lock structures) (http://leah.haifa.ac.il/~skogan/Apache/mydata1/main.html) is a web server that identifies closed loops - a structural basis for protein domain hierarchy. The server is based on the loop-and-lock theory for structural organisation of natural proteins. We describe this web server, the algorithms for the decomposition of a 3D protein into loops and the results of scientific investigations into a structural "alphabet" of loops and locks.

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Simon Kogan, Zakharia Frenkel, Oleg Kupervasser, Zeev Volkovich. 2013-03-27. Hierarchy of protein loop-lock structures: a new server for the decomposition of a protein structure into a set of closed loops. https://doi.org/10.4236/cmb.2013.31001

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