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arXiv · 1108.3436

Modelling of Genetic Regulatory Mechanisms with GReg

Nicolas Sedlmajer·Didier Buchs·Steve Hostettler·Alban Linard·Edmundo Lopez·Alexis Marechal
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Abstract

Most available tools propose simulation frameworks to study models of biological systems, but simulation only explores a few of the most probable behaviours of the system. On the contrary, techniques such as model checking, coming from IT-systems analysis, explore all the possible behaviours of the modelled systems, thus helping to identify emergent properties. A main drawback from most model checking tools in the life sciences domain is that they take as input a language designed for computer scientists, that is not easily understood by non-expert users. We propose in this article an approach based on DSL. It provides a comprehensible language to describe the system while allowing the use of complex and powerful underlying model checking techniques.

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Nicolas Sedlmajer, Didier Buchs, Steve Hostettler, Alban Linard, Edmundo Lopez, Alexis Marechal. 2011-08-17. Modelling of Genetic Regulatory Mechanisms with GReg. https://arxiv.org/abs/1108.3436

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