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arXiv · 1409.1724

Phase diagram of mechanically stretched DNA: The salt effect

Amar Singh·Navin Singh
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Abstract

The cations, in form of salt, present in the solution containing DNA play a crucial role in the opening of two strands of DNA. We use a simple non linear model and investigate the role of these cations on the mechanical unzipping of DNA. The Hamiltonian is modified to incoporate the solvent effect and the cations present in the solution. We calculate the melting temperature as well as the critical force that is required to unzip the DNA molecule as a function of salt concentration of the solution. The phase diagrams are found to be in close agreement with the experimental phase diagrams.

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Amar Singh, Navin Singh. 2014-09-05. Phase diagram of mechanically stretched DNA: The salt effect. https://doi.org/10.1016/j.physa.2013.01.029

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