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arXiv · 1411.2883

A new estimate of mutual information based measure of dependence between two variables: properties and fast implementation

Namita Jain·C. A. Murthy
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Abstract

This article proposes a new method to estimate an existing mutual information based dependence measure using histogram density estimates. Finding a suitable bin length for histogram is an open problem. We propose a new way of computing the bin length for histogram using a function of maximum separation between points. The chosen bin length leads to consistent density estimates for histogram method. The values of density thus obtained are used to calculate an estimate of an existing dependence measure. The proposed estimate is named as Mutual Information Based Dependence Index (MIDI). Some important properties of MIDI have also been stated. The performance of the proposed method has been compared to generally accepted measures like Distance Correlation (dcor), Maximal Information Coefficient (MINE) in terms of accuracy and computational complexity with the help of several artificial data sets with different amounts of noise. The proposed method is able to detect many types of relationships between variables, without making any assumption about the functional form of the relationship. The power statistics of proposed method illustrate their effectiveness in detecting non linear relationship. Thus, it is able to achieve generality without a high rate of false positive cases. MIDI is found to work better on a real life data set than competing methods. The proposed method is found to overcome some of the limitations which occur with dcor and MINE. Computationally, MIDI is found to be better than dcor and MINE, in terms of time and memory, making it suitable for large data sets.

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Namita Jain, C. A. Murthy. 2015-09-14. A new estimate of mutual information based measure of dependence between two variables: properties and fast implementation. https://doi.org/10.1007/s13042-015-0418-6

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