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arXiv · 1509.04031

Simulated single molecule microscopy with SMeagol

Martin Lindén·Vladimir Ćurić·Alexis Boucharin·David Fange·Johan Elf
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Abstract

SMeagol is a software tool to simulate highly realistic microscopy data based on spatial systems biology models, in order to facilitate development, validation, and optimization of advanced analysis methods for live cell single molecule microscopy data. Availability and Implementation: SMeagol runs on Matlab R2014 and later, and uses compiled binaries in C for reaction-diffusion simulations. Documentation, source code, and binaries for recent versions of Mac OS, Windows, and Ubuntu Linux can be downloaded from http://smeagol.sourceforge.net.

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Martin Lindén, Vladimir Ćurić, Alexis Boucharin, David Fange, Johan Elf. 2015-09-14. Simulated single molecule microscopy with SMeagol. https://doi.org/10.1093/bioinformatics/btw109

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