Quantifying efficient information transduction of biochemical signaling cascades

Tatsuaki Tsuruyama

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arXiv · 1605.03452

Quantifying efficient information transduction of biochemical signaling cascades

Tatsuaki Tsuruyama

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Abstract

Cells can be considered as systems that utilize changes in thermodynamic entropy as information. Therefore, they serve as useful models for investigating the relationships between entropy production and information transmission, i.e., signal transduction. Based on the hypothesis that cells apply a chemical reaction cascade for the most efficient transduction of information, we adopted a coding design that minimizes the number of bits per concentration of molecules that are employed for information transduction. As a result, the average rate of entropy production is uniform across all cycles in a cascade reaction. Thus, the entropy production rate can be a valuable measure for the quantification of intracellular signal transduction.

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Tatsuaki Tsuruyama. 2017-03-08. Quantifying efficient information transduction of biochemical signaling cascades. https://arxiv.org/abs/1605.03452

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