Data Augmentation of Spectral Data for Convolutional Neural Network (CNN) Based Deep Chemometrics

Esben Jannik Bjerrum; Mads Glahder; Thomas Skov

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arXiv · 1710.01927

Data Augmentation of Spectral Data for Convolutional Neural Network (CNN) Based Deep Chemometrics

Esben Jannik Bjerrum·Mads Glahder·Thomas Skov

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Abstract

Deep learning methods are used on spectroscopic data to predict drug content in tablets from near infrared (NIR) spectra. Using convolutional neural networks (CNNs), features are ex- tracted from the spectroscopic data. Extended multiplicative scatter correction (EMSC) and a novel spectral data augmentation method are benchmarked as preprocessing steps. The learned models perform better or on par with hypothetical optimal partial least squares (PLS) models for all combinations of preprocessing. Data augmentation with subsequent EMSC in combination gave the best results. The deep learning model CNNs also outperform the PLS models in an extrapolation chal- lenge created using data from a second instrument and from an analyte concentration not covered by the training data. Qualitative investigations of the CNNs kernel activations show their resemblance to wellknown data processing methods such as smoothing, slope/derivative, thresholds and spectral region selection.

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BibTeX RIS

Esben Jannik Bjerrum, Mads Glahder, Thomas Skov. 2017-10-05. Data Augmentation of Spectral Data for Convolutional Neural Network (CNN) Based Deep Chemometrics. https://arxiv.org/abs/1710.01927

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