Tiered Sampling: An Efficient Method for Approximate Counting Sparse Motifs in Massive Graph Streams

Abstract

We introduce Tiered Sampling, a novel technique for approximate counting sparse motifs in massive graphs whose edges are observed in a stream. Our technique requires only a single pass on the data and uses a memory of fixed size $M$, which can be magnitudes smaller than the number of edges. Our methods addresses the challenging task of counting sparse motifs - sub-graph patterns that have low probability to appear in a sample of $M$ edges in the graph, which is the maximum amount of data available to the algorithms in each step. To obtain an unbiased and low variance estimate of the count we partition the available memory to tiers (layers) of reservoir samples. While the base layer is a standard reservoir sample of edges, other layers are reservoir samples of sub-structures of the desired motif. By storing more frequent sub-structures of the motif, we increase the probability of detecting an occurrence of the sparse motif we are counting, thus decreasing the variance and error of the estimate. We demonstrate the advantage of our method in the specific applications of counting sparse 4 and 5-cliques in massive graphs. We present a complete analytical analysis and extensive experimental results using both synthetic and real-world data. Our results demonstrate the advantage of our method in obtaining high-quality approximations for the number of 4 and 5-cliques for large graphs using a very limited amount of memory, significantly outperforming the single edge sample approach for counting sparse motifs in large scale graphs.