Searcharxiv⌕ Search
Home/Archive/arXiv

arXiv · 1803.09914

The Role of Intracellular Interactions in the Collective Polarization of Tissues and its Interplay with Cellular Geometry

Shahriar Shadkhoo·Madhav Mani
View original source ↗Read source document ↗Export metadata ↓

Abstract

Planar cell polarity (PCP), the coherent in-plane polarization of a tissue on multicellular length scales, provides directional information that guides a multitude of developmental processes at cellular and tissue levels. While it is manifest that cells utilize both intracellular and intercellular mechanisms, how the two produce the collective polarization remains an active area of investigation. We study the role of intracellular interactions in the large-scale spatial coherence of cell polarities, and scrutinize the role of intracellular interactions in the emergence of tissue-wide polarization. We demonstrate that nonlocal cytoplasmic interactions are necessary and sufficient for the robust long-range polarization, and are essential to the faithful detection of weak directional signals. In the presence of nonlocal interactions, signatures of geometrical information in tissue polarity become manifest. We investigate the deleterious effects of geometric disorder, and determine conditions on the cytoplasmic interactions that guarantee the stability of polarization. These conditions get progressively more stringent upon increasing the geometric disorder. Another situation where the role of geometrical information might be evident is elongated tissues. Strikingly, our model recapitulates an observed influence of tissue elongation on the orientation of polarity. Eventually, we introduce three classes of mutants: lack of membrane proteins, cytoplasmic proteins, and local geometrical irregularities. We adopt core-PCP as a model pathway, and interpret the model parameters accordingly, through comparing the in silico and in vivo phenotypes. This comparison helps us shed light on the roles of the cytoplasmic proteins in cell-cell communication, and make predictions regarding the cooperation of cytoplasmic and membrane proteins in long-range polarization.

Explore related subjects

physics.bio-phq-bio.TO

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Shahriar Shadkhoo, Madhav Mani. 2019-03-15. The Role of Intracellular Interactions in the Collective Polarization of Tissues and its Interplay with Cellular Geometry. https://doi.org/10.1371/journal.pcbi.1007454

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related papers

arXiv2026

Multiscale retinal flow on a spherical cap of varying aperture

Modelling retinal haemodynamics is crucial for understanding retinal microcirculation but is computationally demanding because it involves coupling between the vasculature and surrounding tissue across multiple scales. This computational burden has been substantially alleviated by a recent analytic solution on the planar disc that enables lumping the capillary bed and surrounding tissue into an effective resistor. However, that formulation treats the retina as a flat surface, whereas the retina is a curved surface with a finite anterior aperture. In this work, we develop a nontrivial and physiologically necessary extension to spherical-cap tissue domains with varying apertures, where surface curvature and finite-aperture boundaries complicate solving coupled Darcy equations on a curved manifold. Using a stereographic projection and a decoupling transformation, we derive an analytic solution for the capillary-tissue system on the spherical cap that represents flow in both the capillary bed and interstitial tissue more realistically while retaining the efficient resistor formulation, a key advantage of the planar-disc formulation. This solution is coupled to one-dimensional (1D) arteriolar and venular flows to obtain a multiscale description of retinal haemodynamics. Using a vasculature model designed to capture retinal vascular features, we show that the multiscale model's predictions are consistent with experimental data. We further explore aperture effects using both a fixed hemispherical vasculature and aperture-dependent vasculature. The aperture affects retinal haemodynamics mainly through changes in the constructed vasculature itself, whereas the surface-averaged pressures and relative terminal flow distributions remain nearly unchanged. This framework provides a foundation for studying retinal pathophysiology on more anatomically realistic domains.

physics.bio-ph↗
arXiv2026

Double-well potentials and crucial estimations in nonlinear dynamics of microtubules

In the present work, we study the two-component model of microtubules, the basic components of the eukaryotic cytoskeleton. We introduce a couple of estimations, which tremendously simplified the model. The paper is devoted to tangential oscillations of dimers, but we explain that the model can explain the radial oscillations as well. Finally, we study the stability of all solutions of differential equations, describing the dynamics of the microtubules.

physics.bio-ph↗
arXiv2026

A thermodynamically consistent framework for finite growth of multi-constituent mixtures with application to tumor growth

Biological tissues grow by continuously producing, transporting, and reorganizing multiple interacting constituents. These processes are intrinsically coupled to finite deformation and residual stress. Existing models typically capture either finite growth kinematics or multi-constituent transport, but rarely both within a thermodynamically consistent setting. In particular, existing approaches do not consistently link the volume created by finite growth to the mass produced for each individual constituent. In this work, we develop a general continuum framework that unifies finite growth kinematics and multiphase mixture theory for fully saturated multi-constituent mixtures containing an arbitrary number of dilute dissolved solutes. Formulated in a solid-skeleton-based description, the framework rests on constituent-wise balance laws and a free-energy dissipation principle, from which thermodynamically admissible constitutive closures are derived for all mass-exchange, transport, reaction, and growth processes. The central novelty of the framework is a coupling between growth-induced volume creation and constituent mass production, expressed through volume accumulation fractions that distribute the newly created volume among the constituents while preserving saturation. We cast the resulting model in a total Lagrangian mixed weak form and specialize the general theory to a four-constituent, two-solute model of avascular tumor growth that couples nutrient transport, waste production, phenotype transitions between proliferative, hypoxic, and necrotic cells, volume growth, elastic deformation, and growth-induced residual stress. The model is implemented within a finite element setting and its capabilities are demonstrated on representative benchmark problems.

physics.bio-ph↗