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arXiv · 1805.06425

Towards In-transit Analysis on Supercomputing Environments

Allan Santos·Hermano Lustosa·Fabio Porto·Bruno Schulze
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Abstract

The drive towards exascale computing is opening an enormous opportunity for more realistic and precise simulations of natural phenomena. The process of simulation, however, involves not only the numerical computation of predictions but also the analysis of results both to evaluate the simulation quality and interpret the simulated phenomenon. In this context, one may consider the duality between transaction and analytical processing to be repositioned in this new context. The co-habitation of simulation computation and analysis has been named after in situ analysis, whereas the separation in different systems considered as in-transit analysis. In this paper we focus in the latter model and study the impact of transferring varying block size data from the simulation system to the analytical one. We use the Remote Direct Memory Access protocol (RDMA) that reduces the interference on performance caused by data copies and context switching. It adopts an in-memory data transfer strategy combined with TCP, using the BSD sockets API and the Linux splice(2) syscall. We present a performance evaluation with our work and traditional utilities.

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Allan Santos, Hermano Lustosa, Fabio Porto, Bruno Schulze. 2018-05-18. Towards In-transit Analysis on Supercomputing Environments. https://arxiv.org/abs/1805.06425

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