ViPIOS - VIenna Parallel Input Output System: Language, Compiler and Advanced Data Structure Support for Parallel I/O Operations

Erich Schikuta; Helmut Wanek; Heinz Stockinger; Kurt Stockinger; Thomas Fürle; Oliver Jorns; Christoph Löffelhardt; Peter Brezany; Minh Dang; Thomas Mück

arXiv · 1808.01166

ViPIOS - VIenna Parallel Input Output System: Language, Compiler and Advanced Data Structure Support for Parallel I/O Operations

Erich Schikuta·Helmut Wanek·Heinz Stockinger·Kurt Stockinger·Thomas Fürle·Oliver Jorns·Christoph Löffelhardt·Peter Brezany·Minh Dang·Thomas Mück

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Abstract

For an increasing number of data intensive scientific applications, parallel I/O concepts are a major performance issue. Tackling this issue, we develop an input/output system designed for highly efficient, scalable and conveniently usable parallel I/O on distributed memory systems. The main focus of this research is the parallel I/O runtime system support provided for software-generated programs produced by parallelizing compilers in the context of High Performance FORTRAN efforts. Specifically, our design aims for the Vienna Fortran Compilation System. In our research project we investigate the I/O problem from a runtime system support perspective. We focus on the design of an advanced parallel I/O support, called ViPIOS (VIenna Parallel I/O System), to be targeted by language compilers supporting the same programming model like High Performance Fortran (HPF). The ViPIOS design is partly influenced by the concepts of parallel database technology. At the beginning of the project we developed a formal model, which forms a theoretical framework on which the ViPIOS design is based. This model describes the mapping of the problem specific data space starting from the application program data structures down to the physical layout on disk across several intermediate representation levels. Based on this formal model we designed and developed an I/O runtime system, ViPIOS, which provides support for several issues, as - parallel access to files for read/write operations, - optimization of data-layout on disks, - redistribution of data stored on disks, - communication of out-of-core (OOC) data, and - many optimizations including data prefetching from disks based on the access pattern knowledge extracted from the program by the compiler or provided by a user specification.

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BibTeX RIS

Erich Schikuta, Helmut Wanek, Heinz Stockinger, Kurt Stockinger, Thomas Fürle, Oliver Jorns, Christoph Löffelhardt, Peter Brezany, Minh Dang, Thomas Mück. 2018-08-03. ViPIOS - VIenna Parallel Input Output System: Language, Compiler and Advanced Data Structure Support for Parallel I/O Operations. https://arxiv.org/abs/1808.01166

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