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arXiv · 1812.10818

Classification of radiology reports by modality and anatomy: A comparative study

Marina Bendersky·Joy Wu·Tanveer Syeda-Mahmood
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Abstract

Data labeling is currently a time-consuming task that often requires expert knowledge. In research settings, the availability of correctly labeled data is crucial to ensure that model predictions are accurate and useful. We propose relatively simple machine learning-based models that achieve high performance metrics in the binary and multiclass classification of radiology reports. We compare the performance of these algorithms to that of a data-driven approach based on NLP, and find that the logistic regression classifier outperforms all other models, in both the binary and multiclass classification tasks. We then choose the logistic regression binary classifier to predict chest X-ray (CXR)/ non-chest X-ray (non-CXR) labels in reports from different datasets, unseen during any training phase of any of the models. Even in unseen report collections, the binary logistic regression classifier achieves average precision values of above 0.9. Based on the regression coefficient values, we also identify frequent tokens in CXR and non-CXR reports that are features with possibly high predictive power.

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Marina Bendersky, Joy Wu, Tanveer Syeda-Mahmood. 2018-12-27. Classification of radiology reports by modality and anatomy: A comparative study. https://arxiv.org/abs/1812.10818

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