Acoustomicrofluidic separation of tardigrades from raw cultures for sample preparation

Muhammad Afzal; Jinsoo Park; Ghulam Destgeer; Husnain Ahmed; Syed Atif Iqrar; Sanghee Kim; Sunghyun Kang; Anas Alazzam; Tae-Sung Yoon; Hyung Jin Sung

arXiv · 1909.03992

Acoustomicrofluidic separation of tardigrades from raw cultures for sample preparation

Muhammad Afzal·Jinsoo Park·Ghulam Destgeer·Husnain Ahmed·Syed Atif Iqrar·Sanghee Kim·Sunghyun Kang·Anas Alazzam·Tae-Sung Yoon·Hyung Jin Sung

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Abstract

Tardigrades are microscopic animals widely known for their survival capabilities under extreme conditions. They are the focus of current research in the fields of taxonomy, biogeography, genomics, proteomics, development, space biology, evolution, and ecology. Tardigrades, such as Hypsibius exemplaris, are being advocated as a next-generation model organism for genomic and developmental studies. The raw culture of H. exemplaris usually contains tardigrades themselves, their eggs, and algal food and feces. Experimentation with tardigrades often requires the demanding and laborious separation of tardigrades from raw samples to prepare pure and contamination-free tardigrade samples. In this paper, we propose a two-step acousto-microfluidic separation method to isolate tardigrades from raw samples. In the first step, a passive microfluidic filter composed of an array of traps is used to remove large algal clusters in the raw sample. In the second step, a surface acoustic wave-based active microfluidic separation device is used to continuously deflect tardigrades from their original streamlines inside the microchannel and thus selectively isolate them from algae and eggs. The experimental results demonstrated the efficient tardigrade separation with a recovery rate of 96% and an algae impurity of 4% on average in a continuous, contactless, automated, rapid, biocompatible manner.

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Muhammad Afzal, Jinsoo Park, Ghulam Destgeer, Husnain Ahmed, Syed Atif Iqrar, Sanghee Kim, Sunghyun Kang, Anas Alazzam, Tae-Sung Yoon, Hyung Jin Sung. 2019-09-09. Acoustomicrofluidic separation of tardigrades from raw cultures for sample preparation. https://arxiv.org/abs/1909.03992

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