Semantic segmentation of multispectral photoacoustic images using deep learning

Melanie Schellenberg; Kris Dreher; Niklas Holzwarth; Fabian Isensee; Annika Reinke; Nicholas Schreck; Alexander Seitel; Minu D. Tizabi; Lena Maier-Hein; Janek Gröhl

doi:10.1016/j.pacs.2022.100341

arXiv · 2105.09624

Semantic segmentation of multispectral photoacoustic images using deep learning

Melanie Schellenberg·Kris Dreher·Niklas Holzwarth·Fabian Isensee·Annika Reinke·Nicholas Schreck·Alexander Seitel·Minu D. Tizabi·Lena Maier-Hein·Janek Gröhl

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Abstract

Photoacoustic (PA) imaging has the potential to revolutionize functional medical imaging in healthcare due to the valuable information on tissue physiology contained in multispectral photoacoustic measurements. Clinical translation of the technology requires conversion of the high-dimensional acquired data into clinically relevant and interpretable information. In this work, we present a deep learning-based approach to semantic segmentation of multispectral photoacoustic images to facilitate image interpretability. Manually annotated photoacoustic {and ultrasound} imaging data are used as reference and enable the training of a deep learning-based segmentation algorithm in a supervised manner. Based on a validation study with experimentally acquired data from 16 healthy human volunteers, we show that automatic tissue segmentation can be used to create powerful analyses and visualizations of multispectral photoacoustic images. Due to the intuitive representation of high-dimensional information, such a preprocessing algorithm could be a valuable means to facilitate the clinical translation of photoacoustic imaging.

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BibTeX RIS

Melanie Schellenberg, Kris Dreher, Niklas Holzwarth, Fabian Isensee, Annika Reinke, Nicholas Schreck, Alexander Seitel, Minu D. Tizabi, Lena Maier-Hein, Janek Gröhl. 2021-05-20. Semantic segmentation of multispectral photoacoustic images using deep learning. https://doi.org/10.1016/j.pacs.2022.100341

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