Coarse-grained crystal graph neural networks for reticular materials design

Abstract

Reticular materials, including metal-organic frameworks and covalent organic frameworks, combine relative ease of synthesis and an impressive range of applications in various fields, from gas storage to biomedicine. Diverse properties arise from the variation of building units$\unicode{x2013}$metal centers and organic linkers$\unicode{x2013}$in almost infinite chemical space. Such variation substantially complicates experimental design and promotes the use of computational methods. In particular, the most successful artificial intelligence algorithms for predicting properties of reticular materials are atomic-level graph neural networks, which optionally incorporate domain knowledge. Nonetheless, the data-driven inverse design involving these models suffers from incorporation of irrelevant and redundant features such as full atomistic graph and network topology. In this study, we propose a new way of representing materials, aiming to overcome the limitations of existing methods; the message passing is performed on a coarse-grained crystal graph that comprises molecular building units. To highlight the merits of our approach, we assessed predictive performance and energy efficiency of neural networks built on different materials representations, including composition-based and crystal-structure-aware models. Coarse-grained crystal graph neural networks showed decent accuracy at low computational costs, making them a valuable alternative to omnipresent atomic-level algorithms. Moreover, the presented models can be successfully integrated into an inverse materials design pipeline as estimators of the objective function. Overall, the coarse-grained crystal graph framework is aimed at challenging the prevailing atom-centric perspective on reticular materials design.