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arXiv · 2312.07996

THz spectroscopy on amino acids

Sebastian Emmert·Peter Lunkenheimer·Alois Loidl
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Abstract

We present a detailed study on the temperature-dependent THz spectra of the polycrystalline amino acids L-serine and L-cysteine for wave numbers from 20 to 120 cm-1 and temperatures from 4 to 300 K. Even though the structure of these two amino acids is very similar, with a sulfur atom in the side chain of cysteine instead of an oxygen atom in serine, the excitation spectra are drastically different. Obviously, the vibrational dynamics strongly depend on the ability of cysteine to form sulfur-hydrogen bonds. In addition, cysteine undergoes an order-disorder type phase transition close to 80 K, with accompanying anomalies in our THz results. On increasing temperatures, well-defined vibrational excitations, exhibit significant shifts in eigenfrequencies with concomitant line-broadening yielding partly overlapping modes. Interestingly, several modes completely lose all their dipolar strength and are unobservable at ambient conditions. Comparing the recent results with published work utilizing THz, Raman, and neutron-scattering techniques, as well as with ab-initio simulations, we aim at a consistent analysis of the results ascribing certain eigenfrequencies to distinct collective lattice modes. We document that THz spectra can be used to fine-tune parameters of model calculations and as a fingerprint property of certain amino acids. In addition, we analyzed the temperature-dependent heat capacity of both compounds and detected strong excess heat capacities at low temperatures compared to the canonical Debye behavior of crystalline solids, indicating soft excitations and a strongly enhanced phonon-density of states at low frequencies.

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Sebastian Emmert, Peter Lunkenheimer, Alois Loidl. 2023-12-13. THz spectroscopy on amino acids. https://arxiv.org/abs/2312.07996

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