SearcharxivSearch

arXiv · 2407.10925

Improved Lower Bounds on the Expected Length of Longest Common Subsequences

Abstract

It has been proven that, when normalized by $n$, the expected length of a longest common subsequence of $d$ random strings of length $n$ over an alphabet of size $\sigma$ converges to some constant that depends only on $d$ and $\sigma$. These values are known as the Chv\'{a}tal-Sankoff constants, and determining their exact values is a well-known open problem. Upper and lower bounds are known for some combinations of $\sigma$ and $d$, with the best lower and upper bounds for the most studied case, $\sigma=2, d=2$, at $0.788071$ and $0.826280$, respectively. Building off previous algorithms for lower-bounding the constants, we implement runtime optimizations, parallelization, and an efficient memory reading and writing scheme to obtain an improved lower bound of $0.792665992$ for $\sigma=2, d=2$. We additionally improve upon almost all previously reported lower bounds for the Chv\'{a}tal-Sankoff constants when either the size of alphabet, the number of strings, or both are larger than 2.

Explore related subjects

Keep this discovery

BibTeXRIS

George T. Heineman, Chase Miller, Daniel Reichman, Andrew Salls, Gábor Sárközy, Duncan Soiffer. 2024-07-15. Improved Lower Bounds on the Expected Length of Longest Common Subsequences. https://arxiv.org/abs/2407.10925

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related papers

Quasi-Monte Carlo Beyond Hardy-Krause II: $(1 + \varepsilon)n$ Samples Suffice

Numerical integration studies how well one can estimate the integral of a function $f$ over $[0,1)^d$ using $n$ sample points. The two classical methods, Monte Carlo (MC) and quasi-Monte Carlo (QMC), have complementary strengths and weaknesses, and a fundamental question is to design an approach that combines the benefits of both. Recently, building on the transference principle in discrepancy theory, Bansal and Jiang~\cite{BJ25a} gave a randomized QMC method that bridges MC and QMC guarantees using only i.i.d.\ samples. Their method also goes beyond the classical Koksma--Hlawka inequality: it achieves integration error $\widetilde{O}_d(\sigma_{\mathsf{SO}}(f)/n)$, where the smoothed-out variation $\sigma_{\mathsf{SO}}(f)$ can be substantially smaller than the Hardy--Krause variation that governs the classical bound. However, their algorithm requires $n^2$ i.i.d.\ samples as input, and this quadratic blowup is inherent to any method based on the transference principle. In this work, we bypass the quadratic blowup: for any constant $\varepsilon > 0$, we show that $(1+\varepsilon)n$ i.i.d.\ samples suffice to both obtain the beyond-Hardy--Krause guarantee of~\cite{BJ25a}, resolving an open problem posed there, and to produce low-discrepancy point sequences. Our algorithms are variants of the online Haar-thinning method of Dwivedi, Feldheim, Gurel-Gurevich, and Ramdas~\cite{DFG+19}.

cs.DS

Single-Exponential Algorithms and a Polynomial Kernel for Strong Connectivity Augmentation

Strong Connectivity Augmentation (SCA) asks whether a directed acyclic graph can be made strongly connected by adding at most $k$ prescribed links whose total weight is within a given budget. Klinkby, Misra, and Saurabh (SODA 2021) gave an $O^*(2^{O(k\log k)})$-time algorithm and asked whether the problem admits a single-exponential parameterized algorithm and a polynomial kernel. We answer both questions affirmatively: SCA can be solved in $O^*(9^k)$ time and admits a polynomial kernel with $O(k^4)$ vertices and $O(k^{16})$ bits. For unweighted SCA, we obtain $O^*(4^k)$ time and a kernel with $O(k^3)$ vertices. Our algorithms are based on a particularly simple reduction to Strongly Connected Spanning Subgraph with two edge costs.

cs.DS