Domain Shift Analysis in Chest Radiographs Classification in a Veterans Healthcare Administration Population

Mayanka Chandrashekar; Ian Goethert; Md Inzamam Ul Haque; Benjamin McMahon; Sayera Dhaubhadel; Kathryn Knight; Joseph Erdos; Donna Reagan; Caroline Taylor; Peter Kuzmak; John Michael Gaziano; Eileen McAllister; Lauren Costa; Yuk-Lam Ho; Kelly Cho; Suzanne Tamang; Samah Fodeh-Jarad; Olga S. Ovchinnikova; Amy C. Justice; Jacob Hinkle; Ioana Danciu

arXiv · 2407.21149

Domain Shift Analysis in Chest Radiographs Classification in a Veterans Healthcare Administration Population

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Abstract

Objectives: This study aims to assess the impact of domain shift on chest X-ray classification accuracy and to analyze the influence of ground truth label quality and demographic factors such as age group, sex, and study year. Materials and Methods: We used a DenseNet121 model pretrained MIMIC-CXR dataset for deep learning-based multilabel classification using ground truth labels from radiology reports extracted using the CheXpert and CheXbert Labeler. We compared the performance of the 14 chest X-ray labels on the MIMIC-CXR and Veterans Healthcare Administration chest X-ray dataset (VA-CXR). The VA-CXR dataset comprises over 259k chest X-ray images spanning between the years 2010 and 2022. Results: The validation of ground truth and the assessment of multi-label classification performance across various NLP extraction tools revealed that the VA-CXR dataset exhibited lower disagreement rates than the MIMIC-CXR datasets. Additionally, there were notable differences in AUC scores between models utilizing CheXpert and CheXbert. When evaluating multi-label classification performance across different datasets, minimal domain shift was observed in unseen datasets, except for the label "Enlarged Cardiomediastinum." The study year's subgroup analyses exhibited the most significant variations in multi-label classification model performance. These findings underscore the importance of considering domain shifts in chest X-ray classification tasks, particularly concerning study years. Conclusion: Our study reveals the significant impact of domain shift and demographic factors on chest X-ray classification, emphasizing the need for improved transfer learning and equitable model development. Addressing these challenges is crucial for advancing medical imaging and enhancing patient care.

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Mayanka Chandrashekar, Ian Goethert, Md Inzamam Ul Haque, Benjamin McMahon, Sayera Dhaubhadel, Kathryn Knight, Joseph Erdos, Donna Reagan, Caroline Taylor, Peter Kuzmak, John Michael Gaziano, Eileen McAllister, Lauren Costa, Yuk-Lam Ho, Kelly Cho, Suzanne Tamang, Samah Fodeh-Jarad, Olga S. Ovchinnikova, Amy C. Justice, Jacob Hinkle, Ioana Danciu. 2024-07-30. Domain Shift Analysis in Chest Radiographs Classification in a Veterans Healthcare Administration Population. https://arxiv.org/abs/2407.21149

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