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arXiv · 2410.16700

AskBeacon -- Performing genomic data exchange and analytics with natural language

Anuradha Wickramarachchi·Shakila Tonni·Sonali Majumdar·Sarvnaz Karimi·Sulev Kõks·Brendan Hosking·Jordi Rambla·Natalie A. Twine·Yatish Jain·Denis C. Bauer
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Abstract

Enabling clinicians and researchers to directly interact with global genomic data resources by removing technological barriers is vital for medical genomics. AskBeacon enables Large Language Models to be applied to securely shared cohorts via the GA4GH Beacon protocol. By simply "asking" Beacon, actionable insights can be gained, analyzed and made publication-ready.

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Anuradha Wickramarachchi, Shakila Tonni, Sonali Majumdar, Sarvnaz Karimi, Sulev Kõks, Brendan Hosking, Jordi Rambla, Natalie A. Twine, Yatish Jain, Denis C. Bauer. 2024-10-22. AskBeacon -- Performing genomic data exchange and analytics with natural language. https://arxiv.org/abs/2410.16700

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