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arXiv · 2503.01179

Algebraic approaches for the decomposition of reaction networks and the determination of existence and number of steady states

Joseph M. Sauder·Bruce P. Ayati·Ryan Kinser
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Abstract

Chemical reaction network theory provides powerful tools for rigorously understanding chemical reactions and the dynamical systems and differential equations that represent them. A frequent issue with mathematical analyses of these networks is the reliance on explicit parameter values which in many cases cannot be determined experimentally. This can make analyzing a dynamical system infeasible, particularly when the size of the system is large. One approach is to analyze subnetworks of the full network and use the results for a full analysis. Our focus is on the equilibria of reaction networks. Gr\"obner basis computation is a useful approach for solving the polynomial equations which correspond to equilibria of a dynamical system. We identify a class of networks for which Gr\"obner basis computations of subnetworks can be used to reconstruct the more expensive Gr\"obner basis computation of the whole network. We compliment this result with tools to determine if a steady state can exist, and if so, how many.

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Joseph M. Sauder, Bruce P. Ayati, Ryan Kinser. 2025-03-03. Algebraic approaches for the decomposition of reaction networks and the determination of existence and number of steady states. https://arxiv.org/abs/2503.01179

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