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arXiv · 2504.05543

Hamiltonian model for energy condensation in classical systems: Relevance to proteins

Jordane Preto·Vania Calandrini·Elena Floriani·Gergely Katona·Marco Pettini
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Abstract

Recent experimental evidence for collective protein vibrations in the terahertz (THz) domain indicates that energy in biomolecular systems can self-organize in an orderly manner, as anticipated by Fr\"ohlich's theory of condensates within a quantum framework. As a first step to bridge THz experiments with theory, we study the Hamiltonian dynamics of a classical network of coupled normal modes representing Fr\"ohlich-type systems. Our results demonstrate that biologically relevant condensates can emerge at room temperature under appropriate nonlinear coupling schemes. The condensation mechanism remains robust also when the original Fr\"ohlich resonance conditions are relaxed.

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Jordane Preto, Vania Calandrini, Elena Floriani, Gergely Katona, Marco Pettini. 2025-04-07. Hamiltonian model for energy condensation in classical systems: Relevance to proteins. https://arxiv.org/abs/2504.05543

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