Searcharxiv⌕ Search

arXiv · 2610.29766

Bayesian Comparison of Covid Origins Hypotheses

Abstract

Applying standard Bayesian methods to the most reliably known unclassified facts about the Covid epidemic allows crude estimation of the odds for research-related vs. purely zoonotic origins. Here a broadly inclusive zoonotic hypothesis is compared with a rather specific subset of the research-related hypothesis defined by known prior work and grant proposals. The important observations are the type of virus, the city of the first outbreak, the lack of known prior hosts, the anomalous early pattern of evolution, and two specific features of the viral sequence. The resulting odds strongly favor research. The odds remain fairly strong under inclusion of uncertainties in prior odds.

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Michael B. Weissman. 2026-10-21. Bayesian Comparison of Covid Origins Hypotheses. https://arxiv.org/abs/2610.29766

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related papers

Drivers of periodicity in population dynamic models of long-lived, large mammals

Population cycles are important components of many natural systems. Most studied in short-lived and small-bodied species, cycles frequently appear to be driven by density-dependent feedbacks. However, compelling evidence of cycles -- often more qualitative than quantitative -- also exists in large mammals. Among ungulates, both density-dependent vital rates and 'cohort effects' (lasting impacts of birth conditions on fecundity and survival) exist, but the implications of such feedbacks for oscillatory population dynamics have not been explored. Here, we present a synthetic model of ungulate population dynamics, parameterized for barren-ground caribou (Rangifer tarandus groenlandicus) and motivated by extensive Indigenous knowledge suggesting decades-long fluctuations in abundance. Caribou herds are theorized to be subject to both cohort effects and density dependence, and we linked these endogenous factors with environmental stochasticity to understand cycling. Using wavelet analysis, we characterized periodic phenomena and performed sensitivity analyses to clarify the drivers and characteristics of population cycles. We found that cohort effects, predominantly those impacting survival, can produce long-period oscillatory behavior across a wide range of environments and demographic structures. Our modeling framework is generalizable to other long-lived, large-bodied species with complex demography, and collectively, these efforts broaden the scope of inquiry into proximal drivers of population cycling.

q-bio.PE↗

When to retire: the cultural evolution of post-reproductive oblique teaching

Teaching is ubiquitous across human societies. Instruction from parents to offspring is the most fundamental form of teaching, explained primarily through kin selection and inclusive fitness. Instruction to non-kin, known as oblique teaching, also plays a dominant role in modern societies, where teaching is often institutionalized. Nonetheless, it remains puzzling how or when oblique teaching can evolve. Here we address the evolution of oblique teaching by developing a mathematical model of stage-structured populations. Younger individuals engage in a useful activity, called hunting, and reproduce. At some point in life, they cease contributing directly to hunting and reproduction, and instead serve exclusively as teachers who increase the hunting expertise of the young. We refer to this transition in life stage as retirement, and we analyze the evolution of the retirement rate, and the resulting frequency of post-reproductive teachers, in a population subject to a global carrying capacity. We find that retirement and teaching can evolve without kinship or inclusive fitness, but only in populations above a threshold size. Unlike in classical adaptive dynamics, the evolutionarily stable retirement rates depend on the absolute population size of a mutant type upon introduction. In many regimes, evolution produces fewer teachers than would maximize the population's per-capita hunting returns or intrinsic birth rate. A mutant that differs only slightly from the resident type generally cannot invade from a minority, so teaching cannot emerge through gradual evolution. The mechanism we describe is therefore available to cultural evolution, where a distinct norm for retirement and elder care may be adopted by a sub-population simultaneously. Our account is thus tied closely to theories of cultural evolution, including the "information grandmother hypothesis" of Henrich and Henrich.

q-bio.PE↗

Invading activity fronts or near-critical clusters may stabilize vulnerable excitable systems against stochastic trajectories terminating in an absorbing state

Stochastic chemical reaction or population dynamics in finite systems often terminates in an absorbing state. Yet in large spatially extended systems, the time to reach the absorbing configuration (e.g., species extinction or fixation) becomes exceedingly long. Tuning control parameters may effectively diminish the survival probability, rendering active states (species coexistence) susceptible to stochastic extinction events. In inhomogeneous settings, where a vulnerable subsystem is diffusively coupled to an adjacent stable patch, the former is re-activated through influx from the interfaces, provided the vulnerable region either sustains spreading activity fronts or near-critical large active clusters. Either dynamical structure resets the system to correlated initial conditions favorable for survival. We demonstrate this generic elimination of finite-size extinction instabilities via immigration flux in stochastic predator-prey, cyclic competition, and epidemic spreading models.

q-bio.PE↗