Searcharxiv⌕ Search

arXiv · 2611.02665

Improving the selection-function-based sensitivity analysis for publication bias with restricted maximum likelihood

Abstract

In random-effects meta-analysis, the between-study variance quantifies the heterogeneity among studies. Without selective publication, the restricted maximum likelihood (REML) method is recommended for this variance, since the maximum likelihood (ML) method underestimates it when the number of studies is small. However, under selective publication, referred to as publication bias (PB), the published studies no longer follow the normal-normal model, and the REML cannot be directly applied. Thus, the existing sensitivity analysis methods for PB based on selection functions estimate the between-study variance by the ML conditional on published studies and inherit its underestimation. This underestimation also affects the estimate of the common effect and its confidence interval. To improve the estimation of the common effect and the heterogeneity, we propose a REML-type estimator of the between-study variance for the selection-function-based sensitivity analysis. It centers the profile score by its approximate mean and reduces exactly to the REML without PB. The proposed sensitivity analysis method is a more accurate alternative to the ML-based sensitivity analysis in meta-analyses with a small number of studies, and it is the first REML-type estimator in the presence of PB. Simulation studies substantiate that the proposed method reduces the median bias of the between-study variance and improves the estimation error and coverage probability for the common effect compared with the conditional ML. We illustrate the proposed method with two meta-analyses on high maintenance-dose clopidogrel and nicotine gum for smoking cessation. The proposed method would give useful guidance on the between-study heterogeneity in sensitivity analysis for PB.

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Taojun Hu, Yi Zhou, Xiao-Hua Zhou, Satoshi Hattori. 2026-11-02. Improving the selection-function-based sensitivity analysis for publication bias with restricted maximum likelihood. https://arxiv.org/abs/2611.02665

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related papers

Debiased Estimating Equation Method for Robust and Efficient Mendelian Randomization Using a Large Number of Correlated Weak and Invalid Instruments

Mendelian randomization (MR) is a widely used tool for causal inference in the presence of unmeasured confounders, which uses single nucleotide polymorphisms (SNPs) as instrumental variables to estimate causal effects. However, SNPs often have weak effects on complex traits, leading to bias in existing MR analyses when weak instruments are included. In addition, existing MR methods often restrict analysis to independent SNPs via linkage disequilibrium clumping and result in a loss of efficiency in estimating the causal effect due to discarding correlated SNPs. To address these issues, we propose the Debiased Estimating Equation Method (DEEM), a summary statistics-based MR approach that can incorporate a large number of correlated, weak-effect, and invalid SNPs. DEEM effectively eliminates the weak instrument bias and improves the statistical efficiency of the causal effect estimation by leveraging information from a large number of correlated SNPs. DEEM also allows for pleiotropic effects, adjusts for the winner's curse, and applies to both two-sample and one-sample MR analyses. Asymptotic analyses of the DEEM estimator demonstrate its attractive theoretical properties. Through extensive simulations and two real data examples, we demonstrate that DEEM significantly improves the efficiency and robustness of MR analysis compared with existing methods.

stat.ME↗

Latent Space Graph-fused LASSO for Clustering in Attributed Graphs

This manuscript studies latent space graph-fused LASSO methods for clustering graphs with multivariate nodal attributes. The framework includes node-specific priors of low-dimensional representations coupled with a neural decoder that bridges the observed attributes with the latent variables. Both structural and attribute information are incorporated for the clustering through a graph-fused LASSO regularization on prior nodal means. The optimization problem is solved via the alternating direction method of multipliers with Langevin dynamics for posterior inference. Simulations on grid and block graphs, together with applications to California county temperatures and Los Angeles traffic data, demonstrate the effectiveness of the proposed method.

stat.ME↗

Missing data and cluster graphs: cluster-level missingness vs variable-level missingness

Missing data is pervasive in many scientific domains such as public health, environmental science, and the social sciences. Recoverability from missing data is typically studied using fully specified variable-level missingness models despite that, in many applications, only coarse structural information is available, for instance when variables are grouped into clusters due to limited knowledge or interpretability reasons. In this paper, we investigate recoverability from such abstract representations. We introduce two classes of cluster-based missingness graphs: the m-C-DMG, which retains variable-specific missingness indicators, and the cm-C-DMG, which aggregates missingness mechanisms at the cluster level. We formalize the notion of compatibility between these abstract graphs and underlying variable-level missingness models, and study how this abstraction affects the recoverability of probabilistic and causal queries. In particular, we give graphical conditions of recovering the joint distribution as well as graphical conditions of recovering a macro causal effect.

stat.ME↗