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Information Capacity of Biological Macromoleculae Reloaded

Michael G. Sadovsky
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Abstract

Information capacity of a symbol sequence is a measure of the unexpectedness of a continuation of given string of symbols. Continuation of a string is determined through the maximum entropy of the reconstructed frequency dictionary; the capacity, in turn, is determined through the calculation of mutual entropy of a real frequency dictionary of a sequence with respect to the reconstructed one. The capacity does not depend on the length of strings in a dictionary. The capacity calculated for various genomes exhibits a multi-minima pattern reflecting an order observed within a sequence.

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Michael G. Sadovsky. 2005-01-10. Information Capacity of Biological Macromoleculae Reloaded. https://arxiv.org/abs/q-bio/0501011

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