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Šimon Kucharský

Publications and source records attributed to Šimon Kucharský.

5 recordsLinked to original sources

Mitigating Representation Gaps in Amortized Bayesian Inference with Auxiliary Supervision

Casting Bayesian inference as a neural network optimization problem targeting an amortized posterior is attractive, as it extends to otherwise intractable statistical models and offers near instantaneous inference for new datasets after prepaying the training cost. Although theory guarantees faithfulness under ideal convergence, practical amortized inference still requires iterating over architectures and optimization choices and ultimately ``satisficing'' under finite simulation, compute, and time budgets. Even the best-performing solution may thus retain avoidable representation gaps that typically require problem-specific fixes. Here, we propose a generic alternative which improves training dynamics with auxiliary guidance losses applied to internal representations. Specifically, we show how such guidance leads to faster convergence when training data is abundant and to better performance when it is scarce. We formalize representation gaps as getting stuck in a local optimum at the information bottleneck between the parts of the network tasked with feature learning and those tasked with conditional distribution learning, and offer a generic diagnostic to separate summary failures from inference failures. Finally, we demonstrate that auxiliary supervision improves convergence speed and accuracy on a range of challenging real-world inference problems.

stat.ML↗

Improving the Accuracy of Amortized Model Comparison with Self-Consistency

Amortized Bayesian model comparison (BMC) enables fast probabilistic ranking of models via simulation-based training of neural surrogates. However, the accuracy of neural surrogates deteriorates when simulation models are misspecified; the very case where model comparison is most needed. We evaluate four different amortized BMC methods. We supplement traditional simulation-based training of these methods with a \emph{self-consistency} (SC) loss on unlabeled real data to improve BMC estimates under distribution shifts. Using one artificial and two real-world case studies, we compare amortized BMC estimators with and without SC against analytic or bridge sampling benchmarks. In the \emph{closed-world} case (data is generated by one of the candidate models), BMC estimators using classifiers work acceptably well even without SC training. However, these methods also benefit the least from SC training. In the \emph{open-world} scenario (all models misspecified), SC training strongly improves BMC estimators when having access to analytic likelihoods, or when surrogate likelihoods are locally accurate near the true parameter posterior, even for severely misspecified models. We conclude with practical recommendations for amortized BMC and suggestions for future research.

stat.ML↗

Amortized Bayesian Mixture Models

Finite mixtures are a broad class of models useful in scenarios where observed data is generated by multiple distinct processes but without explicit information about the responsible process for each data point. Estimating Bayesian mixture models is computationally challenging due to issues such as high-dimensional posterior inference and label switching. Furthermore, traditional methods such as MCMC are applicable only if the likelihoods for each mixture component are analytically tractable. Amortized Bayesian Inference (ABI) is a simulation-based framework for estimating Bayesian models using generative neural networks. This allows the fitting of models without explicit likelihoods, and provides fast inference. ABI is therefore an attractive framework for estimating mixture models. This paper introduces a novel extension of ABI tailored to mixture models. We factorize the posterior into a distribution of the parameters and a distribution of (categorical) mixture indicators, which allows us to use a combination of generative neural networks for parameter inference, and classification networks for mixture membership identification. The proposed framework accommodates both independent and dependent mixture models, enabling filtering and smoothing. We validate and demonstrate our approach through synthetic and real-world datasets.

stat.ML↗

Unsupervised Continual Learning for Amortized Bayesian Inference

Amortized Bayesian Inference (ABI) enables efficient posterior estimation using generative neural networks trained on simulated data, but often suffers from performance degradation under model misspecification. While self-consistency (SC) training on unlabeled empirical data can enhance network robustness, current approaches are limited to static, single-task settings and fail to handle sequentially arriving data or distribution shifts. We propose a continual learning framework for ABI that decouples simulation-based pre-training from unsupervised sequential SC fine-tuning on real-world data. To address the challenge of catastrophic forgetting, we introduce two adaptation strategies: (1) SC with episodic replay, utilizing a memory buffer of past observations, and (2) SC with elastic weight consolidation, which regularizes updates to preserve task-critical parameters. Across three diverse case studies, our methods significantly mitigate forgetting and yield posterior estimates that outperform standard simulation-based training, achieving estimates closer to MCMC reference, providing a viable path for trustworthy ABI across a range of different tasks.

stat.ML↗

Improving the Accuracy of Amortized Model Comparison with Self-Consistency

Amortized Bayesian inference (ABI) offers fast, scalable approximations to posterior densities by training neural surrogates on data simulated from the statistical model. However, ABI methods are highly sensitive to model misspecification: when observed data fall outside the training distribution (generative scope of the statistical models), neural surrogates can behave unpredictably. This makes it a challenge in a model comparison setting, where multiple statistical models are considered, of which at least some are misspecified. Recent work on self-consistency (SC) provides a promising remedy to this issue, accessible even for empirical data (without ground-truth labels). In this work, we investigate how SC can improve amortized model comparison conceptualized in four different ways. Across two synthetic and two real-world case studies, we find that approaches for model comparison that estimate marginal likelihoods through approximate parameter posteriors consistently outperform methods that directly approximate model evidence or posterior model probabilities. SC training improves robustness when the likelihood is available, even under severe model misspecification. The benefits of SC for methods without access of analytic likelihoods are more limited and inconsistent. Our results suggest practical guidance for reliable amortized Bayesian model comparison: prefer parameter posterior-based methods and augment them with SC training on empirical datasets to mitigate extrapolation bias under model misspecification.

stat.ML↗