arXiv subjects
Publications and source records attributed to A. C. Maggs.
We introduce a modified molecular dynamics algorithm that allows one to freeze the dynamics of parts of a physical system, and thus concentrate the simulation effort on selected, central degrees of freedom. This freezing, in contrast to other multi-scale methods, introduces no approximations in the thermodynamic behaviour of the non-central variables while conserving the Newtonian dynamics of the region of physical interest.
In net-neutral systems correlations between charge fluctuations generate strong attractive thermal Casimir forces and engineering these forces to optimize nanodevice performance is an important challenge. We show how the normal and lateral thermal Casimir forces between two plates containing Brownian charges can be modulated by decorrelating the system through the application of an electric field, which generates a nonequilibrium steady state with a constant current in one or both plates, reducing the ensuing fluctuation-generated normal force while at the same time generating a lateral drag force. This hypothesis is confirmed by detailed numerical simulations as well as an analytical approach based on stochastic density functional theory.
Colloidal systems observed in video microscopy are often analysed using the displacements correlation matrix of particle positions. In non-thermal systems, the inverse of this matrix can be interpreted as a pair-interaction potential between particles. If the system is thermally agitated, however, only an effective interaction is accessible from the correlation matrix. We show how this effective interaction differs from the non-thermal case by comparing with high-statistics numerical data from hard-sphere crystals.
We develop a cavity-based method which allows to extract thermodynamic properties from position information in hard-sphere/disk systems. So far, there are 'available-volume' and 'free-volume' methods. We add a third one, which we call 'available-volume-after-takeout', and which is shown to be mathematically equivalent to the others. In applications, where data sets are finite, all three methods show limitations, and they do this in different parameter ranges. We illustrate the principal equivalence and the limitations on data from molecular dynamics -- In particular, we test robustness against missing data. We have in mind experimental limitations where there is a small polydispersity, say 4% in the particle radii, but individual radii cannot be determined. We observe that, depending on the used method, the errors in such a situation are easily 100% for the pressure and 10kT for the chemical potentials. Our work is meant as guideline to the experimentalist for choosing the right one of the three methods, in order to keep the outcome of experimental data analysis meaningful.
We study the Poisson-Boltzmann equation in the context of dense charged fluids where steric effects become important. We generalise the lattice gas theory by introducing a Flory-Huggins entropy for ions of differing volumes and then compare the effective free energy density to other approximations, valid for more realistic equations of state, such as the Carnahan-Starling approximation and find strong differences in the shapes of the free energy functions. We solve the Carnahan-Starling model in the high density limit, and demonstrate a slow, power-law convergence at high potentials. We elucidate how equivalent convex free energy functions can be constructed that describe steric effects in a manner which is more convenient for numerical minimisation.
We study the properties of correlation matrices widely used in the characterisation of vibrational modes in colloidal materials. We show that the eigenvectors in the middle of the spectrum are strongly mixed, but that at both the top and the bottom of the spectrum it is possible to extract a good approximation to the true eigenmodes of an elastic system.
We study the properties of convex functionals which have been proposed for the simulation of charged molecular systems within the Poisson-Boltzmann approximation. We consider the extent to which the functionals reproduce the true fluctuations of electrolytes and thus the one-loop correction to mean field theory -- including the Deby-Hückel correction to the free energy of ionic solutions. We also compare the functionals for use in numerical optimization of a mean field model of a charged polymer and show that different functionals have very different stiffnesses leading to substantial differences in accuracy and speed.
We study the problem of charge regulation and its effects on electrostatic interactions between dissociable charge groups immersed in a univalent electrolyte, within a family of one dimensional exactly solvable models. We consider the case of both charge regulated plates, but also the interaction of pairs of finite size dielectric "particles". Using the transfer matrix formalism we are able to determine the disjoining pressure as well as the correlations between the charge and the dipole moments of the objects as a function of their separation and electrolyte concentration
Electrostatic correlations and fluctuations in ionic systems can be described within an extended Poisson-Boltzmann theory using a Gaussian variational form. The resulting equations are challenging to solve because they require the solution of a non-linear partial differential equation for the pair correlation function. This has limited existing studies to simple approximations or to one-dimensional geometries. In this paper we show that the numerical solution of the equations is greatly simplified by the use of selective inversion of a finite difference operator which occurs in the theory. This selective inversion preserves the sparse structure of the problem and leads to substantial savings in computer effort. In one and two dimensions further simplifications are made by using a mixture of selective inversion and Fourier techniques.
The vibrational modes of pristine and polycrystalline monolayer colloidal crystals composed of thermosensitive microgel particles are measured using video microscopy and covariance matrix analysis. At low frequencies, the Debye relation for two dimensional harmonic crystals is observed in both crystal types; at higher frequencies, evidence for van Hove singularities in the phonon density of states is significantly smeared out by experimental noise and measurement statistics. The effects of these errors are analyzed using numerical simulations. We introduce methods to correct for these limitations, which can be applied to disordered systems as well as crystalline ones, and we show that application of the error correction procedure to the experimental data leads to more pronounced van Hove singularities in the pristine crystal. Finally, quasi-localized low-frequency modes in polycrystalline two-dimensional colloidal crystals are identified and demonstrated to correlate with structural defects such as dislocations, suggesting that quasi-localized low-frequency phonon modes may be used to identify local regions vulnerable to rearrangements in crystalline as well as amorphous solids.
The leapfrog integrator is widely used because of its excellent stability in molecular dynamics simulation. This is recognized as being due to the existence of a discrete variational structure of the equations. We introduce a modified leapfrog method which includes an additional energy-like conservation law by embedding a molecular dynamics simulation within a larger dynamical system.
We review the use of Legendre transforms in the formulation of electrostatic energies in condensed matter. We show how to render standard functionals expressed in terms of the electrostatic potential, Phi, convex - at the cost of expressing them in terms of the vector field D. This leads to great simplification in the formulation of numerical minimisation of electrostatic energies coupled to other physical degrees of freedom. We also demonstrate the equivalence of recent functionals for dielectrics derived using field theory methods to classical formulations in terms of the electric polarisation.
Recent confocal experiments on colloidal solids motivate a fuller study of the projection of three-dimensional fluctuations onto a two-dimensional confocal slice. We show that the effective theory of a projected crystal displays several exceptional features, such as non-standard exponents in the dispersion relations. We provide analytic expressions for the effective two-dimensional elastic properties which allow one to work back from sliced experimental observations to three-dimensional elastic constants.
The Poisson-Boltzmann equation is often presented via a variational formulation based on the electrostatic potential. However, the functional has the defect of being non-convex. It can not be used as a local minimization principle while coupled to other dynamic degrees of freedom. We formulate a convex dual functional which is numerically equivalent at its minimum and which is more suited to local optimization.
Studies by video microscopy on fluctuating colloids measure the real-space cross-correlations in particle motion. This set of correlations is then treated as a matrix, in order to study the spectrum and mode structure. We show that in general the modes are modified by the truncation of the full real-space correlations. We perform a theoretical analysis of the truncation, find the boundary conditions imposed by the truncation, and propose practical windowing strategies to eliminate artefacts. We study the problem from various perspectives, to compile a survey for experimentalists.
We consider the theory of fluctuations of a colloidal solid observed in a confocal slice. For a cubic crystal we study the evolution of the projected elastic properties as a function of the anisotropy of the crystal using numerical methods based on the fast Fourier transform. In certain situations of high symmetry we find exact analytic results for the projected fluctuations.
withdrawn by the author due to double submission in arXiv:1102.4271 .
We study first-order quantum phase transitions in models where the mean-field traitment is exact, and the exponentially fast closure of the energy gap with the system size at the transition. We consider exactly solvable ferromagnetic models, and show that they reduce to the Grover problem in a particular limit. We compute the coefficient in the exponential closure of the gap using an instantonic approach, and discuss the (dire) consequences for quantum annealing.