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Abdolreza Mohammadi

Publications and source records attributed to Abdolreza Mohammadi.

3 recordsLinked to original sources

Multi-Scale Graph Theoretical Analysis of Resting-State fMRI for Classification of Alzheimer's Disease, Mild Cognitive Impairment, and Healthy Controls

Alzheimer's disease (AD) is a neurodegenerative disorder marked by memory loss and cognitive decline, making early detection vital for timely intervention. However, early diagnosis is challenging due to the heterogeneous presentation of symptoms. Resting-state functional magnetic resonance imaging (rs-fMRI) captures spontaneous brain activity and functional connectivity, which are known to be disrupted in AD and mild cognitive impairment (MCI). Traditional methods, such as Pearson's correlation, have been used to calculate association matrices, but these approaches often overlook the dynamic and non-stationary nature of brain activity. In this study, we introduce a novel method that integrates discrete wavelet transform (DWT) and graph theory to model the dynamic behavior of brain networks. Our approach captures the time-frequency representation of brain activity, allowing for a more nuanced analysis of the underlying network dynamics. Machine learning was employed to automate the discrimination of different stages of AD based on learned patterns from brain network at different frequency bands. We applied our method to a dataset of rs-fMRI images from the Alzheimer's Disease Neuroimaging Initiative (ADNI) database, demonstrating its potential as an early diagnostic tool for AD and for monitoring disease progression. Our statistical analysis identifies specific brain regions and connections that are affected in AD and MCI, at different frequency bands, offering deeper insights into the disease's impact on brain function.

q-bio.NC↗

Loglinear model selection and human mobility

Methods for selecting loglinear models were among Steve Fienberg's research interests since the start of his long and fruitful career. After we dwell upon the string of papers focusing on loglinear models that can be partly attributed to Steve's contributions and influential ideas, we develop a new algorithm for selecting graphical loglinear models that is suitable for analyzing hyper-sparse contingency tables. We show how multi-way contingency tables can be used to represent patterns of human mobility. We analyze a dataset of geolocated tweets from South Africa that comprises 46 million latitude/longitude locations of 476,601 Twitter users that is summarized as a contingency table with 214 variables. KEYWORDS: contingency tables, model selection, human mobility, graphical models, Bayesian structural learning, birth-death processes, pseudo-likelihood

stat.ME↗

Bayesian Gaussian Copula Graphical Modeling for Dupuytren Disease

Dupuytren disease is a fibroproliferative disorder with unknown etiology that often progresses and eventually can cause permanent contractures of the affected fingers. In this paper, we provide a computationally efficient Bayesian framework to discover potential risk factors and investigate which fingers are jointly affected. Our Bayesian approach is based on Gaussian copula graphical models, which are one potential way to discover the underlying conditional independence structure of variables in multivariate mixed data. In particular, we combine the semiparametric Gaussian copula with extended rank likelihood which is appropriate to analyse multivariate mixed data with arbitrary marginal distributions. For the graph structure learning, we construct a computationally efficient search algorithm which is a trans-dimensional MCMC algorithm based on a birth-death process. In addition, to make our statistical method easily accessible to other researchers, we have implemented our method in C++ and interfaced with R software as an R package BDgraph which is available online.

stat.AP↗