arXiv subjects

Abdulrahman Aldossary

Publications and source records attributed to Abdulrahman Aldossary.

7 recordsLinked to original sources

arXiv2026

El Agente Gráfico: A Semantic Execution Runtime for Scientific Agents

Large language models (LLMs) can plan scientific workflows and generate code, but these capabilities do not specify how scientific state is validated, transferred and recorded across heterogeneous computational and experimental operations. Here we present El Agente Gráfico, a semantic execution runtime for scientific agents that uses typed execution graphs to enforce admissible scientific state transitions, record provenance and confine model judgement to explicit decision points. Using the same top-level LLM and task-specific rubrics on six university-level quantum chemistry exercises, El Agente Gráfico improved performance while reducing model cost by approximately 80% and wall-clock time by more than fourfold relative to our previous multi-agent architecture. Across ensemble spectroscopy and metal-organic framework (MOF) design, the runtime supported typed-state transfer, parallel execution and cross-session persistence. Open-ended studies of a disulfide redox mechanism and the vibrational hypothesis of olfaction required the agent to define the chemical scope and computational pathway of each investigation. A graph-construction skill distilled from these studies then enabled coding agents to author typed execution graphs for MOF literature mining. Together, these results show how typed execution graphs turn reusable procedural knowledge into scientific protocols that can be inspected, revised and transferred across computational and physical systems.

cs.AI↗

arXiv2026

Faster Algorithmic Quantum and Classical Simulations by Corrected Product Formulas

Hamiltonian simulation using product formulas is arguably the most straightforward and practical approach for algorithmic simulation of a quantum system's dynamics on a quantum computer. Here we present corrected product formulas (CPFs), a variation of product formulas achieved by injecting auxiliary terms called correctors into standard product formulas. We establish several correctors that improve the accuracy of standard product formulas by orders of magnitude when simulating Hamiltonians comprised of two exactly simulatable partitions, a common structure of lattice Hamiltonians. Importantly, injecting these correctors increases the overall simulation cost by only a small additive or multiplicative factor. We show that correctors are particularly advantageous for perturbed systems, where one partition has a relatively small norm compared to the other, as they allow the small norm to be utilized as an additional parameter for controlling the simulation error. We demonstrate the performance of CPFs by numerical simulations for several lattice Hamiltonians. Numerical results show that our theoretical error bounds for CPFs match or outperform the empirical error scaling of standard product formulas for these systems. We also demonstrate improvements offered by CPFs by implementing small-size systems on actual quantum hardware, as well as on noisy and noiseless quantum simulators. CPFs could be a valuable algorithmic tool for early fault-tolerant quantum computers with limited computing resources. As for standard product formulas, CPFs could also be used for simulations on a classical computer.

quant-ph↗

arXiv2026

MōLe-Λ: Learning the Coupled-Cluster Response State for Energies, Gradients, and Properties

Coupled-cluster (CC) theory is often considered the gold standard of quantum chemistry, but its high computational cost limits routine access to accurate energies, forces and response properties. While the right-hand $T$-amplitudes determine the correlated wavefunction, many practically important observables additionally require the left-hand $Λ$-amplitudes. We introduce MōLe-$Λ$, an extension of Molecular Orbital Learning (MōLe) that predicts the full ground-state coupled-cluster singles and doubles (CCSD) response state by jointly learning right-hand amplitudes $(T_1,T_2)$ and left-hand amplitudes $(Λ_1,Λ_2)$ from localized Hartree--Fock molecular orbitals. Architecturally, MōLe-$Λ$ extends MōLe with $Λ_1$ and $Λ_2$ readouts that mirror the symmetry constraints of the $T_1$ and $T_2$ heads, while preserving the original equivariant orbital encoder, odd sign-equivariant decoding, locality and size-extensivity. The resulting model yields accurate CC-quality energies and forces, while simultaneously recovering dipoles, quadrupoles, polarizabilities, the electron density, and 2-electron observables such as the pair density. We show that MōLe-$Λ$ further extends the speed advantage of MōLe over full CCSD while substantially expanding the accessible properties, providing a route to wavefunction-level surrogate models for correlated quantum chemistry.

cs.LG↗

arXiv2026

Coupled Cluster con MōLe: Molecular Orbital Learning for Neural Wavefunctions

Density functional theory (DFT) is the most widely used method for calculating molecular properties; however, its accuracy is often insufficient for quantitative predictions. Coupled-cluster (CC) theory is the most successful method for achieving accuracy beyond DFT and for predicting properties that closely align with experiment. It is known as the ''gold standard'' of quantum chemistry. Unfortunately, the high computational cost of CC limits its widespread applicability. In this work, we present the Molecular Orbital Learning (MōLe) architecture, an equivariant machine learning model that directly predicts CC's core mathematical objects, the excitation amplitudes, from the mean-field Hartree-Fock molecular orbitals as inputs. We test various aspects of our model and demonstrate its remarkable data efficiency and out-of-distribution generalization to larger molecules and off-equilibrium geometries, despite being trained only on small equilibrium geometries. Finally, we also examine its ability to reduce the number of cycles required to converge CC calculations. MōLe can set the foundations for high-accuracy wavefunction-based ML architectures to accelerate molecular design and complement force-field approaches.

cs.LG↗

arXiv2025

El Agente: An Autonomous Agent for Quantum Chemistry

Computational chemistry tools are widely used to study the behaviour of chemical phenomena. Yet, the complexity of these tools can make them inaccessible to non-specialists and challenging even for experts. In this work, we introduce El Agente Q, an LLM-based multi-agent system that dynamically generates and executes quantum chemistry workflows from natural language user prompts. The system is built on a novel cognitive architecture featuring a hierarchical memory framework that enables flexible task decomposition, adaptive tool selection, post-analysis, and autonomous file handling and submission. El Agente Q is benchmarked on six university-level course exercises and two case studies, demonstrating robust problem-solving performance (averaging >87% task success) and adaptive error handling through in situ debugging. It also supports longer-term, multi-step task execution for more complex workflows, while maintaining transparency through detailed action trace logs. Together, these capabilities lay the foundation for increasingly autonomous and accessible quantum chemistry.

cs.AI↗

arXiv2025

Chemically Motivated Simulation Problems are Efficiently Solvable by a Quantum Computer

Simulating chemical systems is highly sought after and computationally challenging, as the number of degrees of freedom increases exponentially with the size of the system. Quantum computers have been proposed as a computational means to overcome this bottleneck , thanks to their capability of representing this amount of information efficiently. Most efforts so far have been centered around determining the ground states of chemical systems. However, hardness results and the lack of theoretical guarantees for efficient heuristics for initial-state generation shed doubt on the feasibility. Here, we propose a heuristically guided approach that is based on inherently efficient routines to solve chemical simulation problems, requiring quantum circuits of size scaling polynomially in relevant system parameters. If a set of assumptions can be satisfied, our approach finds good initial states for dynamics simulation by assembling them in a scattering tree. In particular, we investigate a scattering-based state preparation approach within the context of mergo-association. We discuss a variety of quantities of chemical interest that can be measured after the quantum simulation of a process, e.g., a reaction, following its corresponding initial state preparation.

quant-ph↗

arXiv2024

Spiers Memorial Lecture: How to do impactful research in artificial intelligence for chemistry and materials science

Machine learning has been pervasively touching many fields of science. Chemistry and materials science are no exception. While machine learning has been making a great impact, it is still not reaching its full potential or maturity. In this perspective, we first outline current applications across a diversity of problems in chemistry. Then, we discuss how machine learning researchers view and approach problems in the field. Finally, we provide our considerations for maximizing impact when researching machine learning for chemistry.

cs.LG↗