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Abhishek Varghese

Publications and source records attributed to Abhishek Varghese.

4 recordsLinked to original sources

Bio-Inspired Self-Supervised Learning for Wrist-worn Accelerometer Data

Wearable accelerometers enable large-scale health monitoring, yet learning robust human-activity representations has been constrained by scarce labeled data. While self-supervised learning offers a remedy, existing methods treat sensor streams as unstructured time series, overlooking the underlying biological structure of human movement, a factor we argue is critical for effective Human Activity Recognition (HAR). We introduce a novel tokenization strategy grounded in the submovement theory of motor control, which posits that continuous wrist motion is composed of elementary basis functions called submovements. We define our token as the movement segment, a computationally tractable unit of motion composed of a finite sequence of submovements. By pretraining a Transformer encoder via masked reconstruction of these tokens, we shift the learning focus from local waveform morphology to high-level structural and temporal organization. Pretrained on the NHANES corpus (approximately 28k hours; 11k participants), our representations outperform strong wearable SSL baselines across six subject-disjoint HAR benchmarks. Code and pretrained weights are available at https://prithvitarale.github.io/biopm-site/.

cs.LG↗

QEDCartographer: Automating Formal Verification Using Reward-Free Reinforcement Learning

Formal verification is a promising method for producing reliable software, but the difficulty of manually writing verification proofs severely limits its utility in practice. Recent methods have automated some proof synthesis by guiding a search through the proof space using a theorem prover. Unfortunately, the theorem prover provides only the crudest estimate of progress, resulting in effectively undirected search. To address this problem, we create QEDCartographer, an automated proof-synthesis tool that combines supervised and reinforcement learning to more effectively explore the proof space. QEDCartographer incorporates the proofs' branching structure, enabling reward-free search and overcoming the sparse reward problem inherent to formal verification. We evaluate QEDCartographer using the CoqGym benchmark of 68.5K theorems from 124 open-source Coq projects. QEDCartographer fully automatically proves 21.4% of the test-set theorems. Previous search-based proof-synthesis tools Tok, Tac, ASTactic, Passport, and Proverbot9001, which rely only on supervised learning, prove 9.6%, 9.8%, 10.9%, 12.5%, and 19.8%, respectively. Diva, which combines 62 tools, proves 19.2%. Comparing to the most effective prior tool, Proverbot9001, QEDCartographer produces 34% shorter proofs 29% faster, on average over the theorems both tools prove. Together, QEDCartographer and non-learning-based CoqHammer prove 30.3% of the theorems, while CoqHammer alone proves 26.6%. Our work demonstrates that reinforcement learning is a fruitful research direction for improving proof-synthesis tools' search mechanisms.

cs.SE↗

On the intrinsic dimensionality of Covid-19 data: a global perspective

This paper aims to develop a global perspective of the complexity of the relationship between the standardised per-capita growth rate of Covid-19 cases, deaths, and the OxCGRT Covid-19 Stringency Index, a measure describing a country's stringency of lockdown policies. To achieve our goal, we use a heterogeneous intrinsic dimension estimator implemented as a Bayesian mixture model, called Hidalgo. We identify that the Covid-19 dataset may project onto two low-dimensional manifolds without significant information loss. The low dimensionality suggests strong dependency among the standardised growth rates of cases and deaths per capita and the OxCGRT Covid-19 Stringency Index for a country over 2020-2021. Given the low dimensional structure, it may be feasible to model observable Covid-19 dynamics with few parameters. Importantly, we identify spatial autocorrelation in the intrinsic dimension distribution worldwide. Moreover, we highlight that high-income countries are more likely to lie on low-dimensional manifolds, likely arising from aging populations, comorbidities, and increased per capita mortality burden from Covid-19. Finally, we temporally stratify the dataset to examine the intrinsic dimension at a more granular level throughout the Covid-19 pandemic.

stat.AP↗

Estimating a novel stochastic model for within-field disease dynamics of banana bunchy top virus via approximate Bayesian computation

The Banana Bunchy Top Virus (BBTV) is one of the most economically important vector-borne banana diseases throughout the Asia-Pacific Basin and presents a significant challenge to the agricultural sector. Current models of BBTV are largely deterministic, limited by an incomplete understanding of interactions in complex natural systems, and the appropriate identification of parameters. A stochastic network-based Susceptible-Infected model has been created which simulates the spread of BBTV across the subsections of a banana plantation, parameterising nodal recovery, neighbouring and distant infectivity across summer and winter. Findings from posterior results achieved through Markov Chain Monte Carlo approach to approximate Bayesian computation suggest seasonality in all parameters, which are influenced by correlated changes in inspection accuracy, temperatures and aphid activity. This paper demonstrates how the model may be used for monitoring and forecasting of various disease management strategies to support policy-level decision making.

stat.AP↗