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Abuobaida M. Khair

Publications and source records attributed to Abuobaida M. Khair.

2 recordsLinked to original sources

Harmonic-Aware Transformer for Real-Time Catheter Localization in Interventional Procedures of Magnetic Particle Imaging

Magnetic particle imaging (MPI) enables real-time, radiation-free tracking of magnetic nanoparticle-coated instruments, making it highly suitable for interventional procedures. This study proposes a harmonic-aware transformer framework that directly predicts catheter tip positions from raw MPI voltage signals, eliminating the need for image reconstruction and reducing computational latency. The framework incorporates frequency-domain preprocessing to isolate the 2nd to 8th drive-field harmonics, enhancing the signal-to-noise ratio while preserving motion-relevant features. A transformer architecture with six encoder layers and eight attention heads is employed to learn spatio-temporal dependencies across the three receive axes (x, y, z) for accurate three-dimensional position estimation. The model is trained on simulated MPI signals and evaluated on real in vitro datasets under standard, bending, and heartbeat-like motion conditions. The proposed method achieves sub-millimeter localization accuracy, with a minimum L2 error of 0.103 +/- 0.092 mm and mean absolute errors (MAEs) of 0.039 +/- 0.046 mm, 0.054 +/- 0.049 mm, and 0.060 +/- 0.044 mm along the (x, y, z) axes, respectively, for the bending dataset. Across all datasets, the MAE ranges from 0.165 mm to 0.655 mm, demonstrating consistent performance. The optimized inference achieves a latency of 0.55 ms per frame and a throughput of approximately 1800 frames per second, confirming real-time capability. Compared with conventional MPI-guided approaches relying on image reconstruction, the proposed framework provides improved accuracy, reduced latency, and enhanced robustness under complex motion conditions. These results highlight the potential of harmonic-aware transformer models as efficient and scalable solutions for real-time catheter localization in interventional MPI.

physics.med-ph↗

High-Resolution Magnetic Particle Imaging System Matrix Recovery Using a Vision Transformer with Residual Feature Network

This study presents a hybrid deep learning framework, the Vision Transformer with Residual Feature Network (VRF-Net), for recovering high-resolution system matrices in Magnetic Particle Imaging (MPI). MPI resolution often suffers from downsampling and coil sensitivity variations. VRF-Net addresses these challenges by combining transformer-based global attention with residual convolutional refinement, enabling recovery of both large-scale structures and fine details. To reflect realistic MPI conditions, the system matrix is degraded using a dual-stage downsampling strategy. Training employed paired-image super-resolution on the public Open MPI dataset and a simulated dataset incorporating variable coil sensitivity profiles. For system matrix recovery on the Open MPI dataset, VRF-Net achieved nRMSE = 0.403, pSNR = 39.08 dB, and SSIM = 0.835 at 2x scaling, and maintained strong performance even at challenging scale 8x (pSNR = 31.06 dB, SSIM = 0.717). For the simulated dataset, VRF-Net achieved nRMSE = 4.44, pSNR = 28.52 dB, and SSIM = 0.771 at 2x scaling, with stable performance at higher scales. On average, it reduced nRMSE by 88.2%, increased pSNR by 44.7%, and improved SSIM by 34.3% over interpolation and CNN-based methods. In image reconstruction of Open MPI phantoms, VRF-Net further reduced reconstruction error to nRMSE = 1.79 at 2x scaling, while preserving structural fidelity (pSNR = 41.58 dB, SSIM = 0.960), outperforming existing methods. These findings demonstrate that VRF-Net enables sharper, artifact-free system matrix recovery and robust image reconstruction across multiple scales, offering a promising direction for future in vivo applications.

physics.med-ph↗