arXiv subjects

Achim Zeileis

Publications and source records attributed to Achim Zeileis.

At least 19 recordsLinked to original sources

arXiv2026

Tree models for covariate-dependent method agreement with repeated measurements in clinical research

Background: In clinical research, the Bland-Altman analysis is commonly used to assess agreement of metric measurements made by two or more techniques, devices or methods. The approach can also deal with repeated measurements per subject or observational unit. However, a strong and implicit assumption is that agreement of methods is homogeneous across subjects. Objective: To extend the previously introduced multivariable modeling of conditional method agreement with single measurements per subject to the frequent case of repeated measurements. Methods: Appropriate regression trees, called conditional method agreement trees (COAT), are generalized to capture the dependence of the parameters of the Bland-Altman analysis on covariates. These parameters, the expectation and variance of the differences between the methods, are decomposed into subject-specific components to account for repeated measurements. Whilst the theoretical, asymptotic properties of tree models are known, a simulation study was carried out to assess the performance of COAT in finite samples. A comparison of devices measuring cardiac output serves as an application example. Results: COAT is applicable to the two relevant cases of paired and unpaired repeated measurements. In the simulation study, it controlled the type-I error at the nominal level and could detect covariate-dependent method agreement with increasing sample size. The Adjusted Rand Index, a measure of concordance between the estimated and true subgroups, reached very high values close to the maximum of 1. The analysis of cardiac output showed that patients' characteristics may influence the agreement between measuring devices, with implications for use in patient care. Conclusion: COAT can explicitly define subgroups of heterogeneous method agreement in dependence of covariates with appropriate statistical testing in case of repeated measurements.

stat.ME↗

arXiv2025

Refuting "Debunking the GAMLSS Myth: Simplicity Reigns in Pulmonary Function Diagnostics"

We read with interest the above article by Zavorsky (2025, Respiratory Medicine, doi:10.1016/j.rmed.2024.107836) concerning reference equations for pulmonary function testing. The author compares a Generalized Additive Model for Location, Scale, and Shape (GAMLSS), which is the standard adopted by the Global Lung Function Initiative (GLI), with a segmented linear regression (SLR) model, for pulmonary function variables. The author presents an interesting comparison; however there are some fundamental issues with the approach. We welcome this opportunity for discussion of the issues that it raises. The author's contention is that (1) SLR provides "prediction accuracies on par with GAMLSS"; and (2) the GAMLSS model equations are "complicated and require supplementary spline tables", whereas the SLR is "more straightforward, parsimonious, and accessible to a broader audience". We respectfully disagree with both of these points.

stat.AP↗

arXiv2025

Extended-support beta regression for $[0, 1]$ responses

We introduce the XBX regression model, a continuous mixture of extended-support beta regressions for modelling bounded responses with boundary observations. The core building block of XBX regression is the extended-support beta distribution, a censored version of a four-parameter beta distribution with the same exceedance on the left and right of $(0, 1)$. Hence, XBX regression is a direct extension of beta regression. We prove that beta regression and heteroscedastic normal regression with censoring at both $0$ and $1$ -- also known as the heteroscedastic two-limit tobit model in the econometrics literature -- are special cases of extended-support beta regression, depending on whether a single extra parameter is zero or infinity, respectively. To overcome identifiability issues due to the similarity of the beta and normal distributions for certain parameter values, we shrink towards beta regression by letting the extra parameter have an exponential distribution with unknown mean. A Gauss-Laguerre quadrature approximation results in efficient likelihood-based estimation and inference procedures, which the betareg R package implements since version 3.2.0. We use XBX regression to analyze investment decisions in a behavioural economics experiment about the occurrence and extent of loss aversion. In contrast to standard approaches, we capture both the probability of rational behaviour and the mean of loss aversion. Extensive comparisons with alternative approaches illustrate the effectiveness of the new model.

stat.ME↗

arXiv2024

Long-term foehn reconstruction combining unsupervised and supervised learning

Foehn winds, characterized by abrupt temperature increases and wind speed changes, significantly impact regions on the leeward side of mountain ranges, e.g., by spreading wildfires. Understanding how foehn occurrences change under climate change is crucial. Unfortunately, foehn cannot be measured directly but has to be inferred from meteorological measurements employing suitable classification schemes. Hence, this approach is typically limited to specific periods for which the necessary data are available. We present a novel approach for reconstructing historical foehn occurrences using a combination of unsupervised and supervised probabilistic statistical learning methods. We utilize in-situ measurements (available for recent decades) to train an unsupervised learner (finite mixture model) for automatic foehn classification. These labeled data are then linked to reanalysis data (covering longer periods) using a supervised learner (lasso or boosting). This allows to reconstruct past foehn probabilities based solely on reanalysis data. Applying this method to ERA5 reanalysis data for six stations across Switzerland and Austria achieves accurate hourly reconstructions of north and south foehn occurrence, respectively, dating back to 1940. This paves the way for investigating how seasonal foehn patterns have evolved over the past 83 years, providing valuable insights into climate change impacts on these critical wind events.

stat.AP↗

arXiv2024

colorspace: A Python Toolbox for Manipulating and Assessing Colors and Palettes

The Python colorspace package provides a toolbox for mapping between different color spaces which can then be used to generate a wide range of perceptually-based color palettes for qualitative or quantitative (sequential or diverging) information. These palettes (as well as any other sets of colors) can be visualized, assessed, and manipulated in various ways, e.g., by color swatches, emulating the effects of color vision deficiencies, or depicting the perceptual properties. Finally, the color palettes generated by the package can be easily integrated into standard visualization workflows in Python, e.g., using matplotlib, seaborn, or plotly.

cs.GR↗

arXiv2024

Modeling and Prediction of the UEFA EURO 2024 via Combined Statistical Learning Approaches

In this work, three fundamentally different machine learning models are combined to create a new, joint model for forecasting the UEFA EURO 2024. Therefore, a generalized linear model, a random forest model, and a extreme gradient boosting model are used to predict the number of goals a team scores in a match. The three models are trained on the match results of the UEFA EUROs 2004-2020, with additional covariates characterizing the teams for each tournament as well as three enhanced variables derived from different ranking methods for football teams. The first enhanced variable is based on historic match data from national teams, the second is based on the bookmakers' tournament winning odds of all participating teams, and the third is based on historic match data of individual players both for club and international matches, resulting in player ratings. Then, based on current covariate information of the participating teams, the final trained model is used to predict the UEFA EURO 2024. For this purpose, the tournament is simulated 100.000 times, based on the estimated expected number of goals for all possible matches, from which probabilities across the different tournament stages are derived. Our combined model identifies France as the clear favourite with a winning probability of 19.2%, followed by England (16.7%) and host Germany (13.7%).

cs.LG↗

arXiv2024

Examining Exams Using Rasch Models and Assessment of Measurement Invariance

Many statisticians regularly teach large lecture courses on statistics, probability, or mathematics for students from other fields such as business and economics, social sciences and psychology, etc. The corresponding exams often use a multiple-choice or single-choice format and are typically evaluated and graded automatically, either by scanning printed exams or via online learning management systems. Although further examinations of these exams would be of interest, these are frequently not carried out. For example a measurement scale for the difficulty of the questions (or items) and the ability of the students (or subjects) could be established using psychometric item response theory (IRT) models. Moreover, based on such a model it could be assessed whether the exam is really fair for all participants or whether certain items are easier (or more difficult) for certain subgroups of students. Here, several recent methods for assessing measurement invariance and for detecting differential item functioning in the Rasch IRT model are discussed and applied to results from a first-year mathematics exam with single-choice items. Several categorical, ordered, and numeric covariates like gender, prior experience, and prior mathematics knowledge are available to form potential subgroups with differential item functioning. Specifically, all analyses are demonstrated with a hands-on R tutorial using the psycho* family of R packages (psychotools, psychotree, psychomix) which provide a unified approach to estimating, visualizing, testing, mixing, and partitioning a range of psychometric models. The paper is dedicated to the memory of Fritz Leisch (1968-2024) and his contributions to various aspects of this work are highlighted.

stat.AP↗

arXiv2024

Spatio-seasonal risk assessment of upward lightning at tall objects using meteorological reanalysis data

This study investigates lightning at tall objects and evaluates the risk of upward lightning (UL) over the eastern Alps and its surrounding areas. While uncommon, UL poses a threat, especially to wind turbines, as the long-duration current of UL can cause significant damage. Current risk assessment methods overlook the impact of meteorological conditions, potentially underestimating UL risks. Therefore, this study employs random forests, a machine learning technique, to analyze the relationship between UL measured at Gaisberg Tower (Austria) and $35$ larger-scale meteorological variables. Of these, the larger-scale upward velocity, wind speed and direction at 10 meters and cloud physics variables contribute most information. The random forests predict the risk of UL across the study area at a 1 km$^2$ resolution. Strong near-surface winds combined with upward deflection by elevated terrain increase UL risk. The diurnal cycle of the UL risk as well as high-risk areas shift seasonally. They are concentrated north/northeast of the Alps in winter due to prevailing northerly winds, and expanding southward, impacting northern Italy in the transitional and summer months. The model performs best in winter, with the highest predicted UL risk coinciding with observed peaks in measured lightning at tall objects. The highest concentration is north of the Alps, where most wind turbines are located, leading to an increase in overall lightning activity. Comprehensive meteorological information is essential for UL risk assessment, as lightning densities are a poor indicator of lightning at tall objects.

physics.soc-ph↗

arXiv2023

What Makes Forest-Based Heterogeneous Treatment Effect Estimators Work?

Estimation of heterogeneous treatment effects (HTE) is of prime importance in many disciplines, ranging from personalized medicine to economics among many others. Random forests have been shown to be a flexible and powerful approach to HTE estimation in both randomized trials and observational studies. In particular "causal forests", introduced by Athey, Tibshirani and Wager (2019), along with the R implementation in package grf were rapidly adopted. A related approach, called "model-based forests", that is geared towards randomized trials and simultaneously captures effects of both prognostic and predictive variables, was introduced by Seibold, Zeileis and Hothorn (2018) along with a modular implementation in the R package model4you. Here, we present a unifying view that goes beyond the theoretical motivations and investigates which computational elements make causal forests so successful and how these can be blended with the strengths of model-based forests. To do so, we show that both methods can be understood in terms of the same parameters and model assumptions for an additive model under L2 loss. This theoretical insight allows us to implement several flavors of "model-based causal forests" and dissect their different elements in silico. The original causal forests and model-based forests are compared with the new blended versions in a benchmark study exploring both randomized trials and observational settings. In the randomized setting, both approaches performed akin. If confounding was present in the data generating process, we found local centering of the treatment indicator with the corresponding propensities to be the main driver for good performance. Local centering of the outcome was less important, and might be replaced or enhanced by simultaneous split selection with respect to both prognostic and predictive effects.

stat.ME↗

arXiv2023

Subgroup detection in linear growth curve models with generalized linear mixed model (GLMM) trees

Growth curve models are popular tools for studying the development of a response variable within subjects over time. Heterogeneity between subjects is common in such models, and researchers are typically interested in explaining or predicting this heterogeneity. We show how generalized linear mixed effects model (GLMM) trees can be used to identify subgroups with differently shaped trajectories in linear growth curve models. Originally developed for clustered cross-sectional data, GLMM trees are extended here to longitudinal data. The resulting extended GLMM trees are directly applicable to growth curve models as an important special case. In simulated and real-world data, we assess the performance of the extensions and compare against other partitioning methods for growth curve models. Extended GLMM trees perform more accurately than the original algorithm and LongCART, and similarly accurate as structural equation model (SEM) trees. In addition, GLMM trees allow for modeling both discrete and continuous time series, are less sensitive to (mis-)specification of the random-effects structure and are much faster to compute.

stat.ME↗

arXiv2023

Tree models for assessing covariate-dependent method agreement

Method comparison studies explore the agreement of measurements made by two or more methods. Commonly, agreement is evaluated by the well-established Bland-Altman analysis. However, the underlying assumption is that differences between measurements are identically distributed for all observational units and in all application settings. We introduce the concept of conditional method agreement and propose a respective modeling approach to alleviate this constraint. Therefore, the Bland-Altman analysis is embedded in the framework of recursive partitioning to explicitly define subgroups with heterogeneous agreement in dependence of covariates in an exploratory analysis. Three different modeling approaches, conditional inference trees with an appropriate transformation of the modeled differences (CTreeTrafo), distributional regression trees (DistTree), and model-based trees (MOB) are considered. The performance of these models is evaluated in terms of type-I error probability and power in several simulation studies. Further, the adjusted rand index (ARI) is used to quantify the models' ability to uncover given subgroups. An application example to real data of accelerometer device measurements is used to demonstrate the applicability. Additionally, a two-sample Bland-Altman test is proposed for exploratory or confirmatory hypothesis testing of differences in agreement between subgroups. Results indicate that all models were able to detect given subgroups with high accuracy as the sample size increased. Relevant covariates that may affect agreement could be detected in the application to accelerometer data. We conclude that conditional method agreement trees (COAT) enable the exploratory analysis of method agreement in dependence of covariates and the respective exploratory or confirmatory hypothesis testing of group differences. It is made publicly available through the R package coat.

stat.ME↗

arXiv2023

CRAN Task Views: The Next Generation

CRAN Task Views have been available on the Comprehensive R Archive Network since 2005. They provide guidance about which CRAN packages are relevant for tasks related to a certain topic, and can also facilitate automatic installation of all corresponding packages. Motivated by challenges from the growth of CRAN and the R community as a whole since 2005, all of the task views infrastructure and workflows were rethought and relaunched in 2021/22 in order to facilitate maintenance and to foster deeper interactions with the R community. The redesign encompasses the establishment of a group of CRAN Task View Editors, moving all task view sources to dedicated GitHub repositories, adopting well-documented workflows with a code of conduct, and leveraging R/Markdown files (rather than XML) for the content of the task views.

stat.CO↗

arXiv2023

Coloring in R's Blind Spot

Prior to version 4.0.0 R had a poor default color palette (using highly saturated red, green, blue, etc.) and provided very few alternative palettes, most of which also had poor perceptual properties (like the infamous rainbow palette). Starting with version 4.0.0 R gained a new and much improved default palette and, in addition, a selection of more than 100 well-established palettes are now available via the functions palette.colors() and hcl.colors(). The former provides a range of popular qualitative palettes for categorical data while the latter closely approximates many popular sequential and diverging palettes by systematically varying the perceptual hue, chroma, luminance (HCL) properties in the palette. This paper provides an overview of these new color functions and the palettes they provide along with advice about which palettes are appropriate for specific tasks, especially with regard to making them accessible to viewers with color vision deficiencies.

stat.CO↗

arXiv2023

Upward lightning at wind turbines: Risk assessment from larger-scale meteorology

Upward lightning (UL) has become an increasingly important threat to wind turbines as ever more of them are being installed for renewably producing electricity. The taller the wind turbine the higher the risk that the type of lightning striking the man-made structure is UL. UL can be much more destructive than downward lightning due to its long lasting initial continuous current leading to a large charge transfer within the lightning discharge process. Current standards for the risk assessment of lightning at wind turbines mainly take the summer lightning activity into account, which is inferred from LLS. Ground truth lightning current measurements reveal that less than 50% of UL might be detected by lightning location systems (LLS). This leads to a large underestimation of the proportion of LLS-non-detectable UL at wind turbines, which is the dominant lightning type in the cold season. This study aims to assess the risk of LLS-detectable and LLS-non-detectable UL at wind turbines using direct UL measurements at the Gaisberg Tower (Austria) and Säntis Tower (Switzerland). Direct UL observations are linked to meteorological reanalysis data and joined by random forests, a powerful machine learning technique. The meteorological drivers for the non-/occurrence of LLS-detectable and LLS-non-detectable UL, respectively, are found from the random forest models trained at the towers and have large predictive skill on independent data. In a second step the results from the tower-trained models are extended to a larger study domain (Central and Northern Germany). The tower-trained models for LLS-detectable lightning is independently verified at wind turbine locations in that domain and found to reliably diagnose that type of UL. Risk maps based on case study events show that high diagnosed probabilities in the study domain coincide with actual UL events.

stat.ML↗

arXiv2022

Upward Lightning at the Gaisberg Tower: Initiation Mechanism and Flash Type and the Atmospheric Influence

Upward lightning is much rarer than downward lightning and requires tall ($100+$~m) structures to initiate. It may be either triggered by other lightning discharges or completely self-initiated. While conventional lightning location systems reliably detect downward lightning, they miss a specific flash type of upward lightning that consists only of a continuous current. Globally, only few specially instrumented towers can detect this flash type. The proliferation of wind turbines in combination with large damage from upward lightning necessitates an improved understanding under which conditions the self-initiated and the undetected subtype of upward lightning occur. To find larger-scale meteorological conditions favorable for self-initiated and undetectable upward lightning, this study uses a random forest machine learning model. It combines direct measurements at the specially instrumented tower at Gaisberg mountain in Austria with explanatory variables from larger-scale atmospheric reanalysis data (ERA5). Atmospheric variables reliably explain whether upward lightning is self-initiated by the tower or triggered by other lightning discharges. The most important variable is the height of the $-10~^\circ$C isotherm above the tall structure: the closer it is the higher is the probability of self-initiated upward lightning. Two-meter temperature and the amount of CAPE are also important. For the occurrence of upward lightning undetectable by lightning location systems, this study finds a strong relationship to the absence of lightning in the vicinity.

physics.ao-ph↗

arXiv2021

Cholesky-based multivariate Gaussian regression

Distributional regression is extended to Gaussian response vectors of dimension greater than two by parameterizing the covariance matrix $Σ$ of the response distribution using the entries of its Cholesky decomposition. The more common variance-correlation parameterization limits such regressions to bivariate responses -- higher dimensions require complicated constraints among the correlations to ensure positive definite $Σ$ and a well-defined probability density function. In contrast, Cholesky-based parameterizations ensure positive definiteness for all distributional dimensions no matter what values the parameters take, enabling estimation and regularization as for other distributional regression models. In cases where components of the response vector are assumed to be conditionally independent beyond a certain lag $r$, model complexity can be further reduced by setting Cholesky parameters beyond this lag to zero a priori. Cholesky-based multivariate Gaussian regression is first illustrated and assessed on artificial data and subsequently applied to a real-world 10-dimensional weather forecasting problem. There the regression is used to obtain reliable joint probabilities of temperature across ten future times, leveraging temporal correlations over the prediction period to obtain more precise and meteorologically consistent probabilistic forecasts.

stat.ME↗

arXiv2021

Hybrid Machine Learning Forecasts for the UEFA EURO 2020

Three state-of-the-art statistical ranking methods for forecasting football matches are combined with several other predictors in a hybrid machine learning model. Namely an ability estimate for every team based on historic matches; an ability estimate for every team based on bookmaker consensus; average plus-minus player ratings based on their individual performances in their home clubs and national teams; and further team covariates (e.g., market value, team structure) and country-specific socio-economic factors (population, GDP). The proposed combined approach is used for learning the number of goals scored in the matches from the four previous UEFA EUROs 2004-2016 and then applied to current information to forecast the upcoming UEFA EURO 2020. Based on the resulting estimates, the tournament is simulated repeatedly and winning probabilities are obtained for all teams. A random forest model favors the current World Champion France with a winning probability of 14.8% before England (13.5%) and Spain (12.3%). Additionally, we provide survival probabilities for all teams and at all tournament stages.

cs.LG↗

arXiv2021

Bias Reduction as a Remedy to the Consequences of Infinite Estimates in Poisson and Tobit Regression

Data separation is a well-studied phenomenon that can cause problems in the estimation and inference from binary response models. Complete or quasi-complete separation occurs when there is a combination of regressors in the model whose value can perfectly predict one or both outcomes. In such cases, and such cases only, the maximum likelihood estimates and the corresponding standard errors are infinite. It is less widely known that the same can happen in further microeconometric models. One of the few works in the area is Santos Silva and Tenreyro (2010) who note that the finiteness of the maximum likelihood estimates in Poisson regression depends on the data configuration and propose a strategy to detect and overcome the consequences of data separation. However, their approach can lead to notable bias on the parameter estimates when the regressors are correlated. We illustrate how bias-reducing adjustments to the maximum likelihood score equations can overcome the consequences of separation in Poisson and Tobit regression models.

stat.ME↗