arXiv subjects

Ademir Hujdurović

Publications and source records attributed to Ademir Hujdurović.

24 records · Page 2Linked to original sources

arXiv2017

Graphs vertex-partitionable into strong cliques

A graph is said to be well-covered if all its maximal independent sets are of the same size. In 1999, Yamashita and Kameda introduced a subclass of well-covered graphs, called localizable graphs and defined as graphs having a partition of the vertex set into strong cliques, where a clique in a graph is strong if it intersects all maximal independent sets. Yamashita and Kameda observed that all well-covered trees are localizable, pointed out that the converse inclusion fails in general, and asked for a characterization of localizable graphs. In this paper we obtain several structural and algorithmic results about localizable graphs. Our results include a proof of the fact that every very well-covered graph is localizable and characterizations of localizable graphs within the classes of line graphs, triangle-free graphs, $C_4$-free graphs, and cubic graphs, each leading to a polynomial time recognition algorithm. On the negative side, we prove NP-hardness of recognizing localizable graphs within the classes of weakly chordal graphs, complements of line graphs, and graphs of independence number three. Furthermore, using localizable graphs we disprove a conjecture due to Zaare-Nahandi about $k$-partite well-covered graphs having all maximal cliques of size $k$. Our results unify and generalize several results from the literature.

math.CO↗

arXiv2016

Complexity and algorithms for finding a perfect phylogeny from mixed tumor samples

Recently, Hajirasouliha and Raphael (WABI 2014) proposed a model for deconvoluting mixed tumor samples measured from a collection of high-throughput sequencing reads. This is related to understanding tumor evolution and critical cancer mutations. In short, their formulation asks to split each row of a binary matrix so that the resulting matrix corresponds to a perfect phylogeny and has the minimum number of rows among all matrices with this property. In this paper we disprove several claims about this problem, including an NP-hardness proof of it. However, we show that the problem is indeed NP-hard, by providing a different proof. We also prove NP-completeness of a variant of this problem proposed in the same paper. On the positive side, we propose an efficient (though not necessarily optimal) heuristic algorithm based on coloring co-comparability graphs, and a polynomial time algorithm for solving the problem optimally on matrix instances in which no column is contained in both columns of a pair of conflicting columns. Implementations of these algorithms are freely available at https://github.com/alexandrutomescu/MixedPerfectPhylogeny

q-bio.PE↗

arXiv2015

On automorphisms and structural properties of generalized Cayley graphs

In this paper, generalized Cayley graphs are studied. It is proved that every generalized Cayley graph of order 2p is a Cayley graph, where p is a prime. Special attention is given to generalized Cayley graphs on Abelian groups. It is proved that every generalized Cayley graph on an Abelian group with respect to an automorphism which acts as inversion is a Cayley graph if and only if the group is elementary Abelian 2-group, or its Sylow 2-subgroup is cyclic. Necessary and sufficient conditions for a generalized Cayley graph to be unworthy are given.

math.CO↗

arXiv2015

On Color Preserving Automorphisms of Cayley Graphs of Odd Square-free Order

An automorphism $α$ of a Cayley graph $Cay(G,S)$ of a group $G$ with connection set $S$ is color-preserving if $α(g,gs) = (h,hs)$ or $(h,hs^{-1})$ for every edge $(g,gs)\in E(Cay(G,S))$. If every color-preserving automorphism of $Cay(G,S)$ is also affine, then $Cay(G,S)$ is a CCA (Cayley color automorphism) graph. If every Cayley graph $Cay(G,S)$ is a CCA graph, then $G$ is a CCA group. Hujdurović, Kutnar, D.W. Morris, and J. Morris have shown that every non-CCA group $G$ contains a section isomorphic to the nonabelian group $F_{21}$ of order $21$. We first show that there is a unique non-CCA Cayley graph $Γ$ of $F_{21}$. We then show that if $Cay(G,S)$ is a non-CCA graph of a group $G$ of odd square-free order, then $G = H\times F_{21}$ for some CCA group $H$, and $Cay(G,S) = Cay(G,T)\BoxΓ$.

math.CO↗

arXiv2015

On colour-preserving automorphisms of Cayley graphs

We study the automorphisms of a Cayley graph that preserve its natural edge-colouring. More precisely, we are interested in groups G, such that every such automorphism of every connected Cayley graph on G has a very simple form: the composition of a left-translation and a group automorphism. We find classes of groups that have the property, and we determine the orders of all groups that do not have the property. We also have analogous results for automorphisms that permute the colours, rather than preserving them.

math.CO↗

arXiv2014

Vertex-transitive CIS graphs

A CIS graph is a graph in which every maximal stable set and every maximal clique intersect. A graph is well-covered if all its maximal stable sets are of the same size, co-well-covered if its complement is well-covered, and vertex-transitive if, for every pair of vertices, there exists an automorphism of the graph mapping one to the other. We show that a vertex-transitive graph is CIS if and only if it is well-covered, co-well-covered, and the product of its clique and stability numbers equals its order. A graph is irreducible if no two distinct vertices have the same neighborhood. We classify irreducible well-covered CIS graphs with clique number at most 3 and vertex-transitive CIS graphs of valency at most 7, which include an infinite family. We also exhibit an infinite family of vertex-transitive CIS graphs which are not Cayley.

math.CO↗