arXiv subjects

Aditya Dendukuri

Publications and source records attributed to Aditya Dendukuri.

4 recordsLinked to original sources

arXiv2025

Flux-Preserving Adaptive Finite State Projection for Multiscale Stochastic Reaction Networks

The Finite State Projection (FSP) method approximates the Chemical Master Equation (CME) by restricting the dynamics to a finite subset of the (typically infinite) state space, enabling direct numerical solution with computable error bounds. Adaptive variants update this subset in time, but multiscale systems with widely separated reaction rates remain challenging, as low-probability bottleneck states can carry essential probability flux and the dynamics alternate between fast transients and slowly evolving stiff regimes. We propose a flux-based adaptive FSP method that uses probability flux to drive both state-space pruning and time-step selection. The pruning rule protects low-probability states with large outgoing flux, preserving connectivity in bottleneck systems, while the time-step rule adapts to the instantaneous total flux to handle rate constants spanning several orders of magnitude. Numerical experiments on stiff, oscillatory, and bottleneck reaction networks show that the method maintains accuracy while using substantially smaller state spaces.

cs.CE↗

arXiv2025

Adaptive Finite State Projection with Quantile-Based Pruning for Solving the Chemical Master Equation

We present an adaptive Finite State Projection (FSP) method for efficiently solving the Chemical Master Equation (CME) with rigorous error control. Our approach integrates time-stepping with dynamic state-space truncation, balancing accuracy and computational cost. Krylov subspace methods approximate the matrix exponential, while quantile-based pruning controls state-space growth by removing low-probability states. Theoretical error bounds ensure that the truncation error remains bounded by the pruned mass at each step, which is user-controlled, and does not propagate forward in time. Numerical experiments on biochemical systems, including the Lotka-Volterra and Michaelis-Menten and bi-stable toggle switch models.

cs.CE↗

arXiv2020

Defining Quantum Neural Networks via Quantum Time Evolution

This work presents a novel fundamental algorithm for for defining and training Neural Networks in Quantum Information based on time evolution and the Hamiltonian. Classical Neural Network algorithms (ANN) are computationally expensive. For example, in image classification, representing an image pixel by pixel using classical information requires an enormous amount of computational memory resources. Hence, exploring methods to represent images in a different paradigm of information is important. Quantum Neural Networks (QNNs) have been explored for over 20 years. The current forefront work based on Variational Quantum Circuits is specifically defined for the Continuous Variable (CV) Model of quantum computers. In this work, a model is proposed which is defined at a more fundamental level and hence can be inherited by any variants of quantum computing models. This work also presents a quantum backpropagation algorithm to train our QNN model and validate this algorithm on the MNIST dataset on a quantum computer simulation.

cs.LG↗

arXiv2019

Image Processing in Quantum Computers

Quantum Image Processing (QIP)is an exciting new field showing a lot of promise as a powerful addition to the arsenal of Image Processing techniques. Representing image pixel by pixel using classical information requires an enormous amount of computational resources. Hence, exploring methods to represent images in a different paradigm of information is important. In this work, we study the representation of images in Quantum Information. The main motivation for this pursuit is the ability of storing N bits of classical information in only log(2N) quantum bits (qubits). The promising first step was the exponentially efficient implementation of the Fourier transform in quantum computers as compared to Fast Fourier Transform in classical computers. In addition, images encoded in quantum information could obey unique quantum properties like superposition or entanglement.

cs.CV↗