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Ahmet B. Kilic

Publications and source records attributed to Ahmet B. Kilic.

5 recordsLinked to original sources

Information and Communication Theoretical Foundations of Plant Communication: Mechanisms, Models, and Empirical Approaches

Plants exchange information through chemical, electrical, and mechanical signaling, engaging not only with neighboring plants but also with insects, animals, and microorganisms. These interactions support a broad range of ecological functions, from resource coordination and reproductive signaling to collective responses to environmental change. Despite extensive biological documentation of these processes, their systematic analysis from an Information and Communication Technology (ICT) perspective remains limited. This article addresses that gap as a tutorial with survey elements. It first establishes the biological foundations of plant communication across chemical, mechanical, and electrical modalities, covering the full range of interacting agents and signal functions. Building on this foundation, it reformulates plant signaling within ICT frameworks by defining transmitter, channel, and receiver models for each modality and introducing the relevant mathematical descriptions. Empirical studies and state-of-the-art sensing approaches are then reviewed to ground the models in experimental reality and identify where theory and measurement diverge. The paper concludes with a lessons learned section that distills cross-cutting insights on the fidelity of biology-to-ICT mappings, the distinctive channel properties of plant communication, multimodal coupling, receiver design principles, and observability constraints. By integrating biological depth with communication-theoretic rigor, this article provides a comprehensive foundation for the communications research community and identifies the open problems that will define interdisciplinary progress in this field.

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Acoustic, VOC, and Multimodal Stress Source Localization in the Internet of Plants

The Internet of Plants (IoP) treats distributed plant networks as bio-sensing infrastructure for environmental monitoring, but spatial localization of stress sources within such networks remains unaddressed. Plant stress signals have fundamentally different spatial dynamics: acoustic emissions propagate omnidirectionally and independently of wind, while volatile organic compound (VOC) plumes are narrow and advection-dominated. We propose a two-stage, coarse-to-fine localization pipeline for a network of ``agent plants'' -- bio-hybrid sensing nodes embedded in the canopy. Stage 1 localizes the source via time-difference-of-arrival (TDOA) multilateration on acoustic time-of-arrival (ToA) readings; Stage 2 refines this estimate using a closed-form, steady-state Green's function model of VOC dispersion. A VOC informativeness gate and an inverse-variance fusion rule combine the two estimates according to their across-trial reliability, with graceful degradation to the TDOA-only estimate when no informative VOC signal is detected. We evaluate TDOA-only, VOC-only, and fused approaches on a new open-source dataset of 52 scenarios generated via a finite-volume advection-diffusion solver and a ray-based acoustic attenuation model. Across network densities of 1 to 50 agent plants, TDOA multilateration achieves sub-meter mean absolute error (MAE) once three or more agents are within acoustic range, far outperforming VOC-only localization (MAE $> 3$ m at all densities). Fusion differences from the TDOA-only estimate are small and statistically indistinguishable from noise in most cases. The pipeline is robust to physical parameter perturbations, ToA noise, the VOC gate threshold, and the bounding radius. TDOA localization is deployable with current acoustic hardware, whereas VOC localization remains a forward-looking capability pending advances in compact biochemical sensors.

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Channel Modeling and Experimental Validation of Odor-Based Molecular Communication Systems

Odor-based Molecular Communication (OMC) employs odor molecules to convey information, contributing to the realization of the Internet of Everything (IoE) vision. Despite this, the practical deployment of OMC systems is currently limited by the lack of comprehensive channel models that accurately characterize particle propagation in diverse environments. While existing literature explores various aspects of molecular transport, a holistic approach that integrates theoretical modeling with experimental validation for bounded channels remains underdeveloped. In this paper, we address this gap by proposing mathematical frameworks for both bounded and unbounded OMC channels. To verify the accuracy of the proposed models, we develop a novel experimental testbed and conduct an extensive performance analysis. Our results demonstrate a strong correlation between the theoretical derivations and experimental data, providing a robust foundation for the design and analysis of future end-to-end OMC systems.

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End-to-End Mathematical Modeling of Stress Communication Between Plants

Molecular Communication (MC) is an important communication paradigm found in nature. Odor-based Molecular Communication (OMC) is a specific type of MC with promising potential and a wide range of applications. In this paper, we examine OMC communication between plants in the context of stress communication. Specifically, we explore how plants use Biological Volatile Organic Compounds (BVOCs) to convey information about the stresses they are experiencing to neighboring plants. We constructed an end-to-end mathematical model that discovers the underlying physical and biological phenomena affecting stress communication. To the best of our knowledge, this is the first study to model this end-to-end stress communication. We numerically analyzed our system under different scenarios using MATLAB. Using experimental data from the literature, we demonstrated that continuous gene regulation can approximate BVOC emissions in plants under different stress conditions. Consequently, we applied this model to these stressors and plants to accurately approximate BVOC emissions. We also investigated a modulation method that plants use to send their messages, namely Ratio Shift Keying. Upon analyzing this method, we found that it benefits plants by both enabling a multiple access channel and preventing competitor plants from obtaining the information.

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Odor Perceptual Shift Keying (OPSK) for Odor-Based Molecular Communication

Molecular communication (MC) has promising potential and a wide range of applications. However, odor-based communication which is common in nature, has not been sufficiently examined within the context of MC, yet. In this paper, we introduce a novel approach for implementing odor-based MC systems. We propose a new modulation scheme called Odor Perceptual Shift Keying (OPSK), which encodes information by shifting the perceptual values of odor molecules in pleasantness, intensity and edibility dimensions. We construct a system which transmits OPSK modulated signals between a transmitter and receiver. We conduct analyses on the system parameters to simulate performance metrics such as symbol error rate (SER) and symbol rate (SR). Our analyses indicate that OPSK has a potential for realizing odor-based MC systems. We find that under certain conditions, reliable odor-based MC systems can be implemented using OPSK across a variety of distance ranges from millimeters up to kilometers. Additionally, we introduce adaptive symbol transmission to our system for input symbol sequences featuring symbols that occur with unequal probabilities. We further demonstrate that the proposed algorithm at the transmitter side can achieve extended operation times.

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