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Aidan Acquah

Publications and source records attributed to Aidan Acquah.

4 recordsLinked to original sources

ActiNet: An Open-Source Tool for Activity Intensity Classification of Wrist-Worn Accelerometry Using Self-Supervised Deep Learning

The use of accurate and reliable open-source human activity recognition (HAR) models on passively collected wrist-accelerometer data is essential in large-scale epidemiological studies that investigate the association between physical activity and health outcomes. While self-supervised learning has generated considerable excitement in improving HAR, the extent to which these models, coupled with hidden Markov models (HMMs), would make a tangible improvement to classification performance and the effect this may have on the predicted daily activity intensity compositions is unknown. Using up to 24 hours of wrist-worn accelerometer data from 151 CAPTURE-24 participants (aged 18 - 91, mean age 42, 66% female), we trained the ActiNet model, consisting HARNet, a self-supervised, 18-layer, modified ResNet-V2 model, followed by hidden Markov model (HMM) smoothing to classify labels of activity intensity. The performance of this model, evaluated using 5-fold stratified group cross-validation, was then compared to a baseline random forest (RF) + HMM, established in existing literature. Differences in performance and classification outputs were compared with different subgroups of age and sex within the CAPTURE-24 population. The ActiNet model was able to distinguish labels of activity intensity with a mean macro F1 score of 0.82 and a mean Cohen's kappa score of 0.86. This exceeded the performance of the RF + HMM, trained and validated on the same dataset, with mean scores of 0.76 and 0.80, respectively. The improvements in performance were consistent across subgroups of age and sex. These findings encourage the use of ActiNet for the extraction of activity intensity labels from wrist-accelerometer data in future epidemiological studies.

cs.LG

The Denario project: Deep knowledge AI agents for scientific discovery

We present Denario, an AI multi-agent system designed to serve as a scientific research assistant. Denario can perform many different tasks, such as generating ideas, checking the literature, developing research plans, writing and executing code, making plots, and drafting and reviewing a scientific paper. The system has a modular architecture, allowing it to handle specific tasks, such as generating an idea, or carrying out end-to-end scientific analysis using Cmbagent as a deep-research backend. In this work, we describe in detail Denario and its modules, and illustrate its capabilities by presenting multiple AI-generated papers generated by it in many different scientific disciplines such as astrophysics, biology, biophysics, biomedical informatics, chemistry, material science, mathematical physics, medicine, neuroscience and planetary science. Denario also excels at combining ideas from different disciplines, and we illustrate this by showing a paper that applies methods from quantum physics and machine learning to astrophysical data. We report the evaluations performed on these papers by domain experts, who provided both numerical scores and review-like feedback. We then highlight the strengths, weaknesses, and limitations of the current system. Finally, we discuss the ethical implications of AI-driven research and reflect on how such technology relates to the philosophy of science. We publicly release the code at https://github.com/AstroPilot-AI/Denario. A Denario demo can also be run directly on the web at https://huggingface.co/spaces/astropilot-ai/Denario, and the full app will be deployed on the cloud.

cs.AI

Self-supervised Learning for Human Activity Recognition Using 700,000 Person-days of Wearable Data

Advances in deep learning for human activity recognition have been relatively limited due to the lack of large labelled datasets. In this study, we leverage self-supervised learning techniques on the UK-Biobank activity tracker dataset--the largest of its kind to date--containing more than 700,000 person-days of unlabelled wearable sensor data. Our resulting activity recognition model consistently outperformed strong baselines across seven benchmark datasets, with an F1 relative improvement of 2.5%-100% (median 18.4%), the largest improvements occurring in the smaller datasets. In contrast to previous studies, our results generalise across external datasets, devices, and environments. Our open-source model will help researchers and developers to build customisable and generalisable activity classifiers with high performance.

eess.SP

CAPTURE-24: A large dataset of wrist-worn activity tracker data collected in the wild for human activity recognition

Existing activity tracker datasets for human activity recognition are typically obtained by having participants perform predefined activities in an enclosed environment under supervision. This results in small datasets with a limited number of activities and heterogeneity, lacking the mixed and nuanced movements normally found in free-living scenarios. As such, models trained on laboratory-style datasets may not generalise out of sample. To address this problem, we introduce a new dataset involving wrist-worn accelerometers, wearable cameras, and sleep diaries, enabling data collection for over 24 hours in a free-living setting. The result is CAPTURE-24, a large activity tracker dataset collected in the wild from 151 participants, amounting to 3883 hours of accelerometer data, of which 2562 hours are annotated. CAPTURE-24 is two to three orders of magnitude larger than existing publicly available datasets, which is critical to developing accurate human activity recognition models.

cs.HC