arXiv subjects

Alípio Jorge

Publications and source records attributed to Alípio Jorge.

26 records · Page 2Linked to original sources

arXiv2023

GPT Struct Me: Probing GPT Models on Narrative Entity Extraction

The importance of systems that can extract structured information from textual data becomes increasingly pronounced given the ever-increasing volume of text produced on a daily basis. Having a system that can effectively extract such information in an interoperable manner would be an asset for several domains, be it finance, health, or legal. Recent developments in natural language processing led to the production of powerful language models that can, to some degree, mimic human intelligence. Such effectiveness raises a pertinent question: Can these models be leveraged for the extraction of structured information? In this work, we address this question by evaluating the capabilities of two state-of-the-art language models -- GPT-3 and GPT-3.5, commonly known as ChatGPT -- in the extraction of narrative entities, namely events, participants, and temporal expressions. This study is conducted on the Text2Story Lusa dataset, a collection of 119 Portuguese news articles whose annotation framework includes a set of entity structures along with several tags and attribute values. We first select the best prompt template through an ablation study over prompt components that provide varying degrees of information on a subset of documents of the dataset. Subsequently, we use the best templates to evaluate the effectiveness of the models on the remaining documents. The results obtained indicate that GPT models are competitive with out-of-the-box baseline systems, presenting an all-in-one alternative for practitioners with limited resources. By studying the strengths and limitations of these models in the context of information extraction, we offer insights that can guide future improvements and avenues to explore in this field.

cs.CL↗

arXiv2023

tieval: An Evaluation Framework for Temporal Information Extraction Systems

Temporal information extraction (TIE) has attracted a great deal of interest over the last two decades, leading to the development of a significant number of datasets. Despite its benefits, having access to a large volume of corpora makes it difficult when it comes to benchmark TIE systems. On the one hand, different datasets have different annotation schemes, thus hindering the comparison between competitors across different corpora. On the other hand, the fact that each corpus is commonly disseminated in a different format requires a considerable engineering effort for a researcher/practitioner to develop parsers for all of them. This constraint forces researchers to select a limited amount of datasets to evaluate their systems which consequently limits the comparability of the systems. Yet another obstacle that hinders the comparability of the TIE systems is the evaluation metric employed. While most research works adopt traditional metrics such as precision, recall, and $F_1$, a few others prefer temporal awareness -- a metric tailored to be more comprehensive on the evaluation of temporal systems. Although the reason for the absence of temporal awareness in the evaluation of most systems is not clear, one of the factors that certainly weights this decision is the necessity to implement the temporal closure algorithm in order to compute temporal awareness, which is not straightforward to implement neither is currently easily available. All in all, these problems have limited the fair comparison between approaches and consequently, the development of temporal extraction systems. To mitigate these problems, we have developed tieval, a Python library that provides a concise interface for importing different corpora and facilitates system evaluation. In this paper, we present the first public release of tieval and highlight its most relevant features.

cs.CL↗

arXiv2023

A Biomedical Entity Extraction Pipeline for Oncology Health Records in Portuguese

Textual health records of cancer patients are usually protracted and highly unstructured, making it very time-consuming for health professionals to get a complete overview of the patient's therapeutic course. As such limitations can lead to suboptimal and/or inefficient treatment procedures, healthcare providers would greatly benefit from a system that effectively summarizes the information of those records. With the advent of deep neural models, this objective has been partially attained for English clinical texts, however, the research community still lacks an effective solution for languages with limited resources. In this paper, we present the approach we developed to extract procedures, drugs, and diseases from oncology health records written in European Portuguese. This project was conducted in collaboration with the Portuguese Institute for Oncology which, besides holding over $10$ years of duly protected medical records, also provided oncologist expertise throughout the development of the project. Since there is no annotated corpus for biomedical entity extraction in Portuguese, we also present the strategy we followed in annotating the corpus for the development of the models. The final models, which combined a neural architecture with entity linking, achieved $F_1$ scores of $88.6$, $95.0$, and $55.8$ per cent in the mention extraction of procedures, drugs, and diseases, respectively.

cs.CL↗

arXiv2021

Improving Portuguese Semantic Role Labeling with Transformers and Transfer Learning

The Natural Language Processing task of determining "Who did what to whom" is called Semantic Role Labeling. For English, recent methods based on Transformer models have allowed for major improvements in this task over the previous state of the art. However, for low resource languages, like Portuguese, currently available semantic role labeling models are hindered by scarce training data. In this paper, we explore a model architecture with only a pre-trained Transformer-based model, a linear layer, softmax and Viterbi decoding. We substantially improve the state-of-the-art performance in Portuguese by over 15 F1. Additionally, we improve semantic role labeling results in Portuguese corpora by exploiting cross-lingual transfer learning using multilingual pre-trained models, and transfer learning from dependency parsing in Portuguese, evaluating the various proposed approaches empirically.

cs.CL↗

arXiv2020

ECIR 2020 Workshops: Assessing the Impact of Going Online

ECIR 2020 https://ecir2020.org/ was one of the many conferences affected by the COVID-19 pandemic. The Conference Chairs decided to keep the initially planned dates (April 14-17, 2020) and move to a fully online event. In this report, we describe the experience of organizing the ECIR 2020 Workshops in this scenario from two perspectives: the workshop organizers and the workshop participants. We provide a report on the organizational aspect of these events and the consequences for participants. Covering the scientific dimension of each workshop is outside the scope of this article.

cs.IR↗

arXiv2017

Mind the Gap: A Well Log Data Analysis

The main task in oil and gas exploration is to gain an understanding of the distribution and nature of rocks and fluids in the subsurface. Well logs are records of petro-physical data acquired along a borehole, providing direct information about what is in the subsurface. The data collected by logging wells can have significant economic consequences, due to the costs inherent to drilling wells, and the potential return of oil deposits. In this paper, we describe preliminary work aimed at building a general framework for well log prediction. First, we perform a descriptive and exploratory analysis of the gaps in the neutron porosity logs of more than a thousand wells in the North Sea. Then, we generate artificial gaps in the neutron logs that reflect the statistics collected before. Finally, we compare Artificial Neural Networks, Random Forests, and three algorithms of Linear Regression in the prediction of missing gaps on a well-by-well basis.

cs.AI↗

arXiv2016

PAMPO: using pattern matching and pos-tagging for effective Named Entities recognition in Portuguese

This paper deals with the entity extraction task (named entity recognition) of a text mining process that aims at unveiling non-trivial semantic structures, such as relationships and interaction between entities or communities. In this paper we present a simple and efficient named entity extraction algorithm. The method, named PAMPO (PAttern Matching and POs tagging based algorithm for NER), relies on flexible pattern matching, part-of-speech tagging and lexical-based rules. It was developed to process texts written in Portuguese, however it is potentially applicable to other languages as well. We compare our approach with current alternatives that support Named Entity Recognition (NER) for content written in Portuguese. These are Alchemy, Zemanta and Rembrandt. Evaluation of the efficacy of the entity extraction method on several texts written in Portuguese indicates a considerable improvement on $recall$ and $F_1$ measures.

cs.IR↗

arXiv2015

Accelerating Recommender Systems using GPUs

We describe GPU implementations of the matrix recommender algorithms CCD++ and ALS. We compare the processing time and predictive ability of the GPU implementations with existing multi-core versions of the same algorithms. Results on the GPU are better than the results of the multi-core versions (maximum speedup of 14.8).

cs.IR↗