Alessandro Poma | Searcharxiv

arXiv2020

Combinatorial entropy behaviour leads to range selective binding in ligand-receptor interactions

From viruses to nanoparticles, constructs functionalized with multiple ligands display peculiar binding properties that only arise from multivalent effects. Using statistical mechanical modelling, we describe here how multivalency can be exploited to achieve what we dub range selectivity, that is, binding only to targets bearing a number of receptors within a specified range. We use our model to characterise the region in parameter space where one can expect range selective targeting to occur, and provide experimental support for this phenomenon. Overall, range selectivity represents a potential path to increase the targeting selectivity of multivalent constructs.

cond-mat.soft↗

arXiv2019

Protein structure, activity and thermal stability within nanoscopic compartments

We report that protein confinement within nanoscopic vesicular compartments corresponds to a liquid-liquid phase transition with the protein/water within vesicle lumen interacting very differently than in bulk. We show this effect leads to considerable structural changes on the proteins with evidence suggesting non-alpha helical conformations. Most importantly both aspects lead to a significant improvement on protein stability against thermal denaturation up to 95degC at neutral pH, with little or no evidence of unfolding or reduced enzymatic activity. The latter parameter does indeed exhibit an increase after thermal cycling. Our results suggest that nanoscopic confinement is a promising new avenue for the enhanced long-term storage of proteins. Moreover, our investigations have potentially important implications for the origin of life, since such compartmentalization may well have been critical for ensuring the preservation of primordial functional proteins under relatively harsh conditions, thus playing a key role in the subsequent emergence of primitive life forms.

q-bio.BM↗