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Alex Elchesen

Publications and source records attributed to Alex Elchesen.

7 recordsLinked to original sources

Anti-Vietoris--Rips metric thickenings and Borsuk graphs

For $X$ a metric space and $r\ge 0$, the anti-Vietoris-Rips metric thickening $\mathrm{AVR^m}(X;r)$ is the space of all finitely supported probability measures on $X$ whose support has spread at least $r$, equipped with an optimal transport topology. We study the anti-Vietoris-Rips metric thickenings of spheres. We have a homeomorphism $\mathrm{AVR^m}(S^n;r) \cong S^n$ for $r > \pi$, a homotopy equivalence $\mathrm{AVR^m}(S^n;r) \simeq \mathbb{RP}^{n}$ for $\frac{2\pi}{3} < r \le \pi$, and contractibility $\mathrm{AVR^m}(S^n;r) \simeq *$ for $r=0$. For an $n$-dimensional compact Riemannian manifold $M$, we show that the covering dimension of $\mathrm{AVR^m}(M;r)$ is at most $(n+1)p-1$, where $p$ is the packing number of $M$ at scale $r$. Hence the $k$-dimensional \v{C}ech cohomology of $\mathrm{AVR^m}(M;r)$ vanishes in all dimensions $k\geq (n+1)p$. We prove more about the topology of $\mathrm{AVR^m}(S^n;\frac{2\pi}{3})$, which has vanishing cohomology in dimensions $2n+2$ and higher. We explore connections to chromatic numbers of Borsuk graphs, and in particular we prove that for $k>n$, no graph homomorphism $\mathrm{Bor}(S^k;r) \to \mathrm{Bor}(S^n;\alpha)$ exists when $\alpha > \frac{2\pi}{3}$.

math.AT

Relative Optimal Transport

We develop a theory of optimal transport relative to a distinguished subset, which acts as a reservoir of mass, allowing us to compare measures of different total variation. This relative transportation problem has an optimal solution and we obtain relative versions of the Kantorovich-Rubinstein norm, Wasserstein distance, Kantorovich-Rubinstein duality and Monge-Kantorovich duality. We also prove relative versions of the Riesz-Markov-Kakutani theorem, which connect the spaces of measures arising from the relative optimal transport problem to spaces of Lipschitz functions. For a boundedly compact Polish space, we show that our relative 1-finite real-valued Radon measures with relative Kantorovich-Rubinstein norm coincide with the sequentially order continuous dual of relative Lipschitz functions with the operator norm. As part of our work we develop a theory of Riesz cones that may be of independent interest.

math.MG

A Categorical Approach to M\"obius Inversion via Derived Functors

We develop a cohomological approach to M\"obius inversion using derived functors in the enriched categorical setting. For a poset $P$ and a closed symmetric monoidal abelian category $\mathcal{C}$, we define M\"obius cohomology as the derived functors of an enriched hom functor on the category of $P$-modules. We prove that the Euler characteristic of our cohomology theory recovers the classical M\"obius inversion, providing a natural categorification. As a key application, we prove a categorical version of Rota's Galois Connection. Our approach unifies classical ideas from combinatorics with homological algebra.

math.AT

Learning on Persistence Diagrams as Radon Measures

Persistence diagrams are common descriptors of the topological structure of data appearing in various classification and regression tasks. They can be generalized to Radon measures supported on the birth-death plane and endowed with an optimal transport distance. Examples of such measures are expectations of probability distributions on the space of persistence diagrams. In this paper, we develop methods for approximating continuous functions on the space of Radon measures supported on the birth-death plane, as well as their utilization in supervised learning tasks. Indeed, we show that any continuous function defined on a compact subset of the space of such measures (e.g., a classifier or regressor) can be approximated arbitrarily well by polynomial combinations of features computed using a continuous compactly supported function on the birth-death plane (a template). We provide insights into the structure of relatively compact subsets of the space of Radon measures, and test our approximation methodology on various data sets and supervised learning tasks.

cs.CG

Topological data analysis of C. elegans locomotion and behavior

We apply topological data analysis to the behavior of C. elegans, a widely-studied model organism in biology. In particular, we use topology to produce a quantitative summary of complex behavior which may be applied to high-throughput data. Our methods allow us to distinguish and classify videos from various environmental conditions and we analyze the trade-off between accuracy and interpretability. Furthermore, we present a novel technique for visualizing the outputs of our analysis in terms of the input. Specifically, we use representative cycles of persistent homology to produce synthetic videos of stereotypical behaviors.

math.AT

Virtual persistence diagrams, signed measures, Wasserstein distances, and Banach spaces

Persistence diagrams, an important summary in topological data analysis, consist of a set of ordered pairs, each with positive multiplicity. Persistence diagrams are obtained via Mobius inversion and may be compared using a one-parameter family of metrics called Wasserstein distances. In certain cases, Mobius inversion produces sets of ordered pairs which may have negative multiplicity. We call these virtual persistence diagrams. Divol and Lacombe recently showed that there is a Wasserstein distance for Radon measures on the half plane of ordered pairs that generalizes both the Wasserstein distance for persistence diagrams and the classical Wasserstein distance from optimal transport theory. Following this work, we define compatible Wasserstein distances for persistence diagrams and Radon measures on arbitrary metric spaces. We show that the 1-Wasserstein distance extends to virtual persistence diagrams and to signed measures. In addition, we characterize the Cauchy completion of persistence diagrams with respect to the Wasserstein distances. We also give a universal construction of a Banach space with a 1-Wasserstein norm. Persistence diagrams with the 1-Wasserstein distance isometrically embed into this Banach space.

math.AT

Universality of persistence diagrams and the bottleneck and Wasserstein distances

We prove that persistence diagrams with the p-Wasserstein distance form the universal p-subadditive commutative monoid on an underlying metric space with a distinguished subset. This result applies to persistence diagrams, barcodes, and to multiparameter persistence modules. In addition, the 1-Wasserstein distance satisfies Kantorovich-Rubinstein duality.

math.AT