arXiv subjects

Alexander C. Paul

Publications and source records attributed to Alexander C. Paul.

10 recordsLinked to original sources

arXiv2025

eT 2.0: An efficient open-source molecular electronic structure program

The eT program is an open-source electronic structure program with emphasis on performance and modularity. As its name suggests, the program features extensive coupled cluster capabilities, performing well compared to other electronic structure programs, and, in some cases, outperforming commercial alternatives. However, eT is more than a coupled cluster program; other models based on wave function theory (such as full and reduced space configuration interaction and a variety of self-consistent field models) and density functional theory are supported. The second major release of the program, eT 2.0, has specialized functionality for strong light-matter coupling conditions. In addition, it includes a wide range of optimizations and algorithmic improvements, as well as new capabilities for exploring potential energy surfaces and for modeling experiments in the UV and X-ray regimes. Molecular gradients are now available at the coupled cluster level, and high-accuracy spectroscopic simulations are available at reduced computational cost within the multilevel coupled cluster and multiscale frameworks. We present the modifications to the program since its first major release, eT 1.0, highlighting some notable new features and demonstrating the performance of the new version relative to the first release and to other established electronic structure programs.

physics.chem-ph↗

arXiv2024

Electronic dynamics created at conical intersections and its dephasing in aqueous solution

A dynamical rearrangement in the electronic structure of a molecule can be driven by different phenomena, including nuclear motion, electronic coherence or electron correlation. Recording such electronic dynamics and identifying their fate in aqueous solution has remained a challenge. Here, we reveal the electronic dynamics induced by electronic relaxation through conical intersections in pyrazine molecules using X-ray spectroscopy. We show that the ensuing created dynamics corresponds to a cyclic rearrangement of the electronic structure around the aromatic ring. Furthermore, we find that such electronic dynamics are entirely suppressed when pyrazine is dissolved in water. Our observations confirm that conical intersections can create electronic dynamics that are not directly excited by the pump pulse and that aqueous solvation can dephase them in less than 40 fs. These results have implications for the investigation of electronic dynamics created during light-induced molecular dynamics and shed light on their susceptibility to aqueous solvation.

physics.chem-ph↗

arXiv2024

Unexpected hydrogen dissociation in thymine: predictions from a novel coupled cluster theory

The fate of thymine upon excitation by ultraviolet radiation has been the subject of intense debate over the past three decades. Today, it is widely believed that its ultrafast excited state decay stems from a radiationless transition from the bright $ππ^*$ state to a dark $nπ^*$ state. However, conflicting theoretical predictions have made the experimental data difficult to interpret. Here we simulate the ultrafast dynamics in thymine at the highest level of theory to date, performing wavepacket dynamics with a new coupled cluster method. Our simulation confirms an ultrafast $ππ^*$ to $nπ^*$ transition ($τ = 41 \pm 14$ fs). Furthermore, the predicted oxygen-edge X-ray absorption spectra agree quantitatively with the experimental results. Our simulation also predicts an as-yet uncharacterized photochemical pathway: a $πσ^*$ channel that leads to hydrogen dissociation at one of the two N-H bonds in thymine. Similar behavior has been identified in other heteroaromatic compounds, including adenine, and several authors have speculated that a similar pathway may exist in thymine. However, this was never confirmed theoretically or experimentally. This prediction calls for renewed efforts to experimentally identify or exclude the presence of this channel.

physics.chem-ph↗

arXiv2024

X-ray Absorption Spectra for Aqueous Ammonia and Ammonium: Quantum Mechanical versus Molecular Mechanical Embedding Schemes

The X-ray absorption (XA) spectra of aqueous ammonia and ammonium are computed using a combination of coupled cluster singles and doubles (CCSD) with different quantum mechanical and molecular mechanical embedding schemes. Specifically, we compare frozen Hartree--Fock (HF) density embedding, polarizable embedding (PE), and polarizable density embedding (PDE). Integrating CCSD with frozen HF density embedding is possible within the CC-in-HF framework, which circumvents the conventional system-size limitations of standard coupled cluster methods. We reveal similarities between PDE and frozen HF density descriptions, while PE spectra differ significantly. By including approximate triple excitations, we also investigate the effect of improving the electronic structure theory. The spectra computed using this approach show an improved intensity ratio compared to CCSD-in-HF. Charge transfer analysis of the excitations shows the local character of the pre-edge and main-edge, while the post-edge is formed by excitations delocalized over the first solvation shell and beyond.

physics.chem-ph↗

arXiv2023

Understanding X-ray absorption in liquid water: triple excitations in multilevel coupled cluster theory

We present the first successful application of the coupled cluster approach to simulate the X-ray absorption (XA) spectrum of liquid water. The system size limitations of standard coupled cluster theory are overcome by employing a newly developed coupled cluster method for large molecular systems. This method combines coupled cluster singles, doubles, and perturbative triples in a multilevel framework (MLCC3-in-HF) and is able to describe the delicate nature of intermolecular interactions in liquid water. Using molecular geometries from state-of-the-art path-integral molecular dynamics, we obtain excellent agreement with experimental spectra. Additionally, we show that an accurate description of the electronic structure within the first solvation shell is sufficient to model the XA spectrum of liquid water. Furthermore, we present a rigorous charge transfer analysis with unprecedented reliability, achieved through MLCC3-in-HF. This analysis aligns with previous studies regarding the character of the prominent features of the spectrum.

physics.chem-ph↗

arXiv2022

Oscillator strengths in the framework of equation of motion multilevel CC3

We present an efficient implementation of the equation of motion oscillator strengths for the closed-shell multilevel coupled cluster singles and doubles with perturbative triples method (MLCC3) in the electronic structure program eT. The orbital space is split into an active part treated with CC3 and an inactive part computed at the coupled cluster singles and doubles (CCSD) level of theory. Asymptotically, the CC3 contribution scales as $O(n_\text{V} n^3_\text{v} n^3_\text{o})$ floating-point operations (FLOP), where $n_V$ is the total number of virtual orbitals while $n_\text{v}$ and $n_\text{o}$ are the number of active virtual and occupied orbitals, respectively. The CC3 contribution, thus, only scales linearly with the full system size and can become negligible compared to the cost of CCSD. We demonstrate the capabilities of our implementation by calculating the UV-VIS spectrum of azobenzene and a core excited state of betaine 30 with more than 1000 molecular orbitals.

physics.chem-ph↗

arXiv2021

Simulating weak-field attosecond processes with a Lanczos reduced basis approach to time-dependent equation of motion coupled cluster theory

A time-dependent equation of motion coupled cluster singles and doubles (TD-EOM-CCSD) method is implemented, which uses a reduced basis calculated with the asymmetric band Lanczos algorithm. The approach is used to study weak-field processes in small molecules induced by ultrashort valence pump and core probe pulses. We assess the reliability of the procedure by comparing TD-EOM-CCSD absorption spectra to spectra obtained from the time-dependent coupled-cluster singles and doubles (TDCCSD) method and observe that spectral features can be reproduced for several molecules, at much lower computational times. We discuss how multiphoton absorption and symmetry can be handled in the method and general features of the core-valence separation (CVS) projection technique. We also model the transient absorption of an attosecond X-ray probe pulse by the glycine molecule.

physics.chem-ph↗

arXiv2020

A new and efficient implementation of CC3

We present a new and efficient implementation of the closed shell coupled cluster singles and doubles with perturbative triples method (CC3) in the electronic structure program $e^T$. Asymptotically, a ground state calculation has an iterative cost of $4n_{\text{V}}^{4}n_{\text{O}}^{3}$ floating point operations (FLOP), where $n_{\text{V}}$ and $n_{\text{O}}$ are the number of virtual and occupied orbitals respectively. The Jacobian and transpose Jacobian transformations, required to iteratively solve for excitation energies and transition moments, both require $8n_{\text{V}}^{4}n_{\text{O}}^{3}$ FLOP. We have also implemented equation of motion (EOM) transition moments for CC3. The EOM transition densities require recalculation of triples amplitudes, as $n_{\text{V}}^{3}n_{\text{O}}^{3}$ tensors are not stored in memory. This results in a noniterative computational cost of $10n_{\text{V}}^{4}n_{\text{O}}^{3}$ FLOP for the ground state density and $26n_{\text{V}}^{4}n_{\text{O}}^{3}$ FLOP per state for the transition densities. The code is compared to the CC3 implementations in CFOUR, Dalton and Psi4. We demonstrate the capabilities of our implementation by calculating valence and core excited states of L-proline.

physics.chem-ph↗

arXiv2020

Transient Resonant Auger-Meitner Spectra of Photoexcited Thymine

We present the first investigation of excited state dynamics by resonant Auger-Meitner spectroscopy (also known as resonant Auger spectroscopy) using the nucleobase thymine as an example. Thymine is photoexcited in the UV and probed with X-ray photon energies at and below the oxygen K-edge. After initial photoexcitation to a ππ* excited state, thymine is known to undergo internal conversion to an nπ* excited state with a strong resonance at the oxygen K-edge, red-shifted from the ground state π* resonances of thymine (see our previous study Wolf et al., Nat. Commun., 2017, 8, 29). We resolve and compare the Auger-Meitner electron spectra associated both with the excited state and ground state resonances, and distinguish participator and spectator decay contributions. Furthermore, we observe simultaneously with the decay of the nπ* state signatures the appearance of additional resonant Auger-Meitner contributions at photon energies between the nπ* state and the ground state resonances. We assign these contributions to population transfer from the nπ* state to a ππ* triplet state via intersystem crossing on the picosecond timescale based on simulations of the X-ray absorption spectra in the vibrationally hot triplet state. Moreover, we identify signatures from the initially excited ππ* singlet state which we have not observed in our previous study.

physics.chem-ph↗

arXiv2020

eT 1.0: an open source electronic structure program with emphasis on coupled cluster and multilevel methods

The eT program is an open source electronic structure package with emphasis on coupled cluster and multilevel methods. It includes efficient spin adapted implementations of ground and excited singlet states, as well as equation of motion oscillator strengths, for CCS, CC2, CCSD, and CC3. Furthermore, eT provides unique capabilities such as multilevel Hartree-Fock and multilevel CC2, real-time propagation for CCS and CCSD, and efficient CC3 oscillator strengths. With a coupled cluster code based on an efficient Cholesky decomposition algorithm for the electronic repulsion integrals, eT has similar advantages as codes using density fitting, but with strict error control. Here we present the main features of the program and demonstrate its performance through example calculations. Because of its availability, performance, and unique capabilities, we expect eT to become a valuable resource to the electronic structure community.

physics.chem-ph↗