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Alexander Daryin

Publications and source records attributed to Alexander Daryin.

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Accelerating scientific discovery with Co-Scientist

Scientific discovery is driven by scientists generating novel hypotheses for complex problems that undergo rigorous experimental validation. To augment this process, we introduce Co-Scientist, a multi-agent AI system built on Gemini for structured scientific thinking and hypothesis generation. Co-Scientist aims to help scientists discover new original knowledge. Conditioned on their research objectives and prior scientific evidence, it formulates demonstrably novel research hypotheses for experimental verification. The system's design involves agents continuously generating, critiquing and refining hypotheses accelerated by scaling test-time compute. Key contributions include: (1) a multi-agent architecture with an asynchronous task execution framework for flexible compute scaling; (2) a tournament evolution process for self-improving hypotheses generation. Automated evaluations show continued benefits of test-time compute scaling, improving hypothesis quality over time. While general purpose, we focus the validation in three biomedical applications: drug repurposing, novel target discovery, and explaining mechanisms of anti-microbial resistance. Specifically, Co-Scientist helped identify new drug repurposing candidates and synergistic combination therapies for acute myeloid leukemia, which were validated through in vitro experiments. These real-world validations demonstrate the potential of Co-Scientist to accelerate scientific discovery and usher in an era of AI empowered scientists.

cs.AI

Fast Multi-language LSTM-based Online Handwriting Recognition

We describe an online handwriting system that is able to support 102 languages using a deep neural network architecture. This new system has completely replaced our previous Segment-and-Decode-based system and reduced the error rate by 20%-40% relative for most languages. Further, we report new state-of-the-art results on IAM-OnDB for both the open and closed dataset setting. The system combines methods from sequence recognition with a new input encoding using Bézier curves. This leads to up to 10x faster recognition times compared to our previous system. Through a series of experiments we determine the optimal configuration of our models and report the results of our setup on a number of additional public datasets.

cs.CL

SmartChoices: Hybridizing Programming and Machine Learning

We present SmartChoices, an approach to making machine learning (ML) a first class citizen in programming languages which we see as one way to lower the entrance cost to applying ML to problems in new domains. There is a growing divide in approaches to building systems: on the one hand, programming leverages human experts to define a system while on the other hand behavior is learned from data in machine learning. We propose to hybridize these two by providing a 3-call API which we expose through an object called SmartChoice. We describe the SmartChoices-interface, how it can be used in programming with minimal code changes, and demonstrate that it is an easy to use but still powerful tool by demonstrating improvements over not using ML at all on three algorithmic problems: binary search, QuickSort, and caches. In these three examples, we replace the commonly used heuristics with an ML model entirely encapsulated within a SmartChoice and thus requiring minimal code changes. As opposed to previous work applying ML to algorithmic problems, our proposed approach does not require to drop existing implementations but seamlessly integrates into the standard software development workflow and gives full control to the software developer over how ML methods are applied. Our implementation relies on standard Reinforcement Learning (RL) methods. To learn faster, we use the heuristic function, which they are replacing, as an initial function. We show how this initial function can be used to speed up and stabilize learning while providing a safety net that prevents performance to become substantially worse -- allowing for a safe deployment in critical applications in real life.

cs.LG