arXiv subjects

Alexander Zhiliakov

Publications and source records attributed to Alexander Zhiliakov.

6 recordsLinked to original sources

arXiv2022

Tangential Navier-Stokes equations on evolving surfaces: Analysis and simulations

The paper considers a system of equations that models a lateral flow of a Boussinesq--Scriven fluid on a passively evolving surface embedded in $\mathbb{R}^3$. For the resulting Navier-Stokes type system, posed on a smooth closed time-dependent surface, we introduce a weak formulation in terms of functional spaces on a space-time manifold defined by the surface evolution. The weak formulation is shown to be well-posed for any finite final time and without smallness conditions on data. We further extend an unfitted finite element method, known as TraceFEM, to compute solutions to the fluid system. Convergence of the method is demonstrated numerically. In another series of experiments we visualize lateral flows induced by smooth deformations of a material surface.

math.AP↗

arXiv2022

Recycling augmented Lagrangian preconditioner in an incompressible fluid solver

The paper discusses a reuse of matrix factorization as a building block in the Augmented Lagrangian (AL) and modified AL preconditioners for non-symmetric saddle point linear algebraic systems. The strategy is applied to solve two-dimensional incompressible fluid problems with efficiency rates independent of the Reynolds number. The solver is then tested to simulate motion of a surface fluid, an example of a 2D flow motivated by an interest in lateral fluidity of inextensible viscous membranes. Numerical examples include the Kelvin--Helmholtz instability problem posed on the sphere and on the torus. Some new eigenvalue estimates for the AL preconditioner are derived.

math.NA↗

arXiv2021

A decoupled, stable, and linear FEM for a phase-field model of variable density two-phase incompressible surface flow

The paper considers a thermodynamically consistent phase-field model of a two-phase flow of incompressible viscous fluids. The model allows for a non-linear dependence of fluid density on the phase-field order parameter. Driven by applications in biomembrane studies, the model is written for tangential flows of fluids constrained to a surface and consists of (surface) Navier-Stokes-Cahn-Hilliard type equations. We apply an unfitted finite element method to discretize the system and introduce a fully discrete time-stepping scheme with the following properties: (i) the scheme decouples the fluid and phase-field equation solvers at each time step, (ii) the resulting two algebraic systems are linear, and (iii) the numerical solution satisfies the same stability bound as the solution of the original system under some restrictions on the discretization parameters. Numerical examples are provided to demonstrate the stability, accuracy, and overall efficiency of the approach. Our computational study of several two-phase surface flows reveals some interesting dependencies of flow statistics on the geometry.

math.NA↗

arXiv2020

Experimental validation of a phase-field model to predict coarsening dynamics of lipid domains in multicomponent membranes

Membrane phase-separation is a mechanism that biological membranes often use to locally concentrate specific lipid species in order to organize diverse membrane processes. Phase separation has also been explored as a tool for the design of liposomes with heterogeneous and spatially organized surfaces. These "patchy" liposomes are promising platforms for delivery purposes, however their design and optimization through experimentation can be expensive and time-consuming. We developed a computationally efficient method based on the surface Cahn-Hilliard phase-field model to complement experimental investigations in the design of patchy liposomes. The method relies on thermodynamic considerations to set the initial state for numerical simulations. We show that our computational approach delivers not only qualitative pictures, but also accurate quantitative information about the dynamics of the membrane organization. In particular, the computational and experimental results are in excellent agreement in terms of raft area fraction, total raft perimeter over time and total number of rafts over time for two different membrane compositions (DOPC:DPPC with a 2:1 molar ratio with 20% Chol and DOPC:DPPC with a 3:1 molar ratio with 20% Chol). Thus, the computational phase-field model informed by experiments has a considerable potential to assist in the design of liposomes with spatially organized surfaces, thereby containing the cost and time required by the design process.

physics.comp-ph↗

arXiv2020

Inf-sup stability of the trace P2-P1 Taylor-Hood elements for surface PDEs

The paper studies a geometrically unfitted finite element method (FEM), known as trace FEM or cut FEM, for the numerical solution of the Stokes system posed on a closed smooth surface. A trace FEM based on standard Taylor-Hood (continuous P2-P1) bulk elements is proposed. A so-called volume normal derivative stabilization, known from the literature on trace FEM, is an essential ingredient of this method. The key result proved in the paper is an inf-sup stability of the trace P2-P1 finite element pair, with the stability constant uniformly bounded with respect to the discretization parameter and the position of the surface in the bulk mesh. Optimal order convergence of a consistent variant of the finite element method follows from this new stability result and interpolation properties of the trace FEM. Properties of the method are illustrated with numerical examples.

math.NA↗

arXiv2020

Error analysis of higher order trace finite element methods for the surface Stokes equations

The paper studies a higher order unfitted finite element method for the Stokes system posed on a surface in three-dimensional space. The method employs generalized Taylor-Hood finite element pairs on tetrahedral bulk mesh to discretize the Stokes system on embedded surface. Stability and optimal order convergence results are proved. The proofs include a complete quantification of geometric errors stemming from approximate parametric representation of the surface. Numerical experiments include formal convergence studies and an example of the Kelvin-Helmholtz instability problem on the unit sphere.

math.NA↗