arXiv subjects

Alexandros G. Dimakis

Publications and source records attributed to Alexandros G. Dimakis.

At least 19 recordsLinked to original sources

arXiv2026

Multimodal QUD: Inquisitive Questions from Scientific Figures

Discourse comprehension in complex documents often involves continuously posing and resolving Questions Under Discussion (QUDs). While QUD frameworks have so far focused on text, scientific literature is inherently multimodal: figures convey discourse goals distinct from their textual counterparts, thus invoking implicit questions that the surrounding text answers. In scientific discovery, knowing the right questions to ask is as important as knowing how to answer them, yet this capability remains largely absent in current models. In this work, we extend QUD to multimodal discourse in scientific literature, targeting questions evoked by figures that are (1) inquisitive, i.e., not resolved in the prior context; (2) salient, i.e., relevant to the paper's research claims and addressed later in the paper; (3) grounded in visual insights. To benchmark model capability to generate such questions, we introduce MQUD, a dataset of 1,250 figure-evoked questions from 56 scientific papers, including 708 questions annotated by the original authors of these papers. Our experiments show that open-source VLMs such as Qwen 3.5 predominantly ask questions that can be answered by the figure alone. Fine-tuning on MQUD teaches the model to ask scientifically relevant, inquisitive questions that target the role a figure plays in the paper's argument.

cs.CL↗

arXiv2026

The Time is Here for Just-in-Time Systems: Challenges and Opportunities

Core systems like key-value stores have historically taken years to build, and are designed to be general so as to amortize cost across deployments, paying a significant performance cost. We argue that LLM-based coding agents now make a different approach tractable: Just-in-Time Systems, in which the entire system is synthesized from scratch, specialized to the environment, workload, and required system properties. We present a JIT system synthesis pipeline, Jitskit, and explore its effectiveness in synthesizing key-value stores from spec cards that span different YCSB workloads, deployment constraints (e.g., compute resources), and system properties (e.g., consistency and durability). Jitskit iteratively refines a system implementation to match the specification against an evolving evaluation test suite. The resulting synthesized systems are performant, beating comparable state-of-the-art systems on 18 of 18 specs tried, by up to 4.6x over the best off-the-shelf baseline on the most favorable spec. Naively running Claude Code either reward-hacks or underperforms Jitskit by up to 5.4x. We discuss the challenges we overcame in building Jitskit and our key takeaways.

cs.DB↗

arXiv2026

optimize_anything: A Universal API for Optimizing any Text Parameter

Can a single LLM-based optimization system match specialized tools across fundamentally different domains? We show that when optimization problems are formulated as improving a text artifact evaluated by a scoring function, a single AI-based optimization system-supporting single-task search, multi-task search with cross-problem transfer, and generalization to unseen inputs-achieves state-of-the-art results across six diverse tasks. Our system discovers agent architectures that nearly triple Gemini Flash's ARC-AGI accuracy (32.5% to 89.5%), finds scheduling algorithms that cut cloud costs by 40%, generates CUDA kernels where 87% match or beat PyTorch, and outperforms AlphaEvolve's reported circle packing solution (n=26). Ablations across three domains reveal that actionable side information yields faster convergence and substantially higher final scores than score-only feedback, and that multi-task search outperforms independent optimization given equivalent per-problem budget through cross-task transfer, with benefits scaling with the number of related tasks. Together, we show for the first time that text optimization with LLM-based search is a general-purpose problem-solving paradigm, unifying tasks traditionally requiring domain-specific algorithms under a single framework. We open-source optimize\_anything with support for multiple backends as part of the GEPA project at https://github.com/gepa-ai/gepa .

cs.CL↗

arXiv2026

How to Train Your Advisor: Steering Black-Box LLMs with Advisor Models

Frontier language models are deployed as black-box services, where model weights cannot be modified and customization is limited to prompting. We introduce Advisor Models, a method to train small open-weight models to generate dynamic, per-instance natural language advice that improves the capabilities of black-box frontier models. Advisor Models improve GPT-5.2's performance on RuleArena (Taxes) by 27.4%, reduce Gemini 3 Pro's steps taken in SWE agent tasks by 24.6%, and outperform static prompt optimizers in personalizing GPT-5 to user preferences (85-100% vs. 40-60%). We also find that advisors are transferable: an advisor trained with a low-cost student model still transfers improvements to a frontier model. Moreover, Advisor Models are robust: we observe no degradation on other benchmarks than the pipeline is trained on. Our method shows how to perform parametric optimization for black-box frontier models in a practical and cost-effective way.

cs.LG↗

arXiv2026

EvoX: Meta-Evolution for Automated Discovery

Recent work such as AlphaEvolve has shown that combining LLM-driven optimization with evolutionary search can effectively improve programs, prompts, and algorithms across domains. In this paradigm, previously evaluated solutions are reused to guide the model toward new candidate solutions. Crucially, the effectiveness of this evolution process depends on the search strategy: how prior solutions are selected and varied to generate new candidates. However, most existing methods rely on fixed search strategies with predefined knobs (e.g., explore-exploit ratios) that remain static throughout execution. While effective in some settings, these approaches often fail to adapt across tasks, or even within the same task as the search space changes over time. We introduce EvoX, an adaptive evolution method that optimizes its own evolution process. EvoX jointly evolves candidate solutions and the search strategies used to generate them, continuously updating how prior solutions are selected and varied based on progress. This enables the system to dynamically shift between different search strategies during the optimization process. Across nearly 200 real-world optimization tasks, EvoX outperforms existing AI-driven evolutionary methods including AlphaEvolve, OpenEvolve, GEPA, and ShinkaEvolve on the majority of tasks.

cs.LG↗

arXiv2026

When Attention Collapses: How Degenerate Layers in LLMs Enable Smaller, Stronger Models

Large Language Models (LLMs) are known for their performance, but we uncover a significant structural inefficiency: a phenomenon we term attention collapse. In many pre-trained decoder-style LLMs, the attention matrices in deeper layers degenerate, collapsing to near rank-one structures. These underutilized layers, which we call lazy layers, are redundant and impair model efficiency. To address this, we introduce Inheritune, a simple yet powerful training recipe designed to build smaller, stronger language models. Inheritune initializes a compact model by inheriting the potent early layers from a larger pre-trained model and then progressively trains and expands it. Our experiments on various models, including the GPT-2 family, demonstrate that models trained with Inheritune can match or even surpass the performance of their larger counterparts, despite having significantly fewer layers. This work presents a novel path toward model compression by design, enabling the creation of compact, yet highly performant language models. Code is available at https://github.com/sanyalsunny111/LLM-Inheritune.

cs.CL↗

arXiv2026

GEPA: Reflective Prompt Evolution Can Outperform Reinforcement Learning

Large language models (LLMs) are increasingly adapted to downstream tasks via reinforcement learning (RL) methods like Group Relative Policy Optimization (GRPO), which often require thousands of rollouts to learn new tasks. We argue that the interpretable nature of language often provides a much richer learning medium for LLMs, compared to policy gradients derived from sparse, scalar rewards. To test this, we introduce GEPA (Genetic-Pareto), a prompt optimizer that thoroughly incorporates natural language reflection to learn high-level rules from trial and error. Given any AI system containing one or more LLM prompts, GEPA samples trajectories (e.g., reasoning, tool calls, and tool outputs) and reflects on them in natural language to diagnose problems, propose and test prompt updates, and combine complementary lessons from the Pareto frontier of its own attempts. As a result of GEPA's design, it can often turn even just a few rollouts into a large quality gain. Across six tasks, GEPA outperforms GRPO by 6% on average and by up to 20%, while using up to 35x fewer rollouts. GEPA also outperforms the leading prompt optimizer, MIPROv2, by over 10% (e.g., +12% accuracy on AIME-2025), and demonstrates promising results as an inference-time search strategy for code optimization. We release our code at https://github.com/gepa-ai/gepa .

cs.CL↗

arXiv2026

Optimizing Sampling Patterns for Compressed Sensing MRI with Diffusion Generative Models

Magnetic resonance imaging (MRI) is a powerful medical imaging modality, but long acquisition times limit throughput, patient comfort, and clinical accessibility. Diffusion-based generative models serve as strong image priors for reducing scan-time with accelerated MRI reconstruction and offer robustness across variations in the acquisition model. However, most existing diffusion-based approaches do not exploit the unique ability in MRI to jointly design both the sampling pattern and the reconstruction method. While prior learning-based approaches have optimized sampling patterns for end-to-end unrolled networks, analogous methods for diffusion-based reconstruction have not been established due to the computational burden of posterior sampling. In this work, we propose a method to optimize k-space sampling patterns for accelerated multi-coil MRI reconstruction using diffusion models as priors. We introduce a training objective based on a single-step posterior mean estimate that avoids backpropagation through an expensive iterative reconstruction process. Then we present a greedy strategy for learning Cartesian sampling patterns that selects informative k-space locations using gradient information from a pre-trained diffusion model while enforcing spatial diversity among samples. Experimental results across multiple anatomies and acceleration factors demonstrate that diffusion models using the optimized sampling patterns achieve higher-quality reconstructions in comparison to using fixed and learned baseline patterns.

cs.LG↗

arXiv2026

SIEVE: Sample-Efficient Parametric Learning from Natural Language

Natural language context-such as instructions, knowledge, or feedback-contains rich signal for adapting language models. While in-context learning provides adaptation via the prompt, parametric learning persists into model weights and can improve performance further, though is data hungry and heavily relies on either high-quality traces or automated verifiers. We propose SIEVE, a method for sample-efficient parametric learning from natural language context that requires as few as three query examples. SIEVE uses a novel synthetic data generation pipeline, SIEVE-GEN, that leverages the insight that context is decomposable. Decomposing context allows us to generate higher quality rollouts by pairing synthetic queries with only the applicable context rather than the entirety, then using context distillation to internalize context into the model. We evaluate in reasoning settings where context is necessary, including custom domains and the RuleArena and Machine Translation from One Book tasks. Our results show that SIEVE outperforms prior context distillation methods using just three query examples, demonstrating how to achieve sample-efficient parametric learning from natural language.

cs.LG↗

arXiv2025

Large Language Models as Realistic Microservice Trace Generators

Workload traces are essential to understand complex computer systems' behavior and manage processing and memory resources. Since real-world traces are hard to obtain, synthetic trace generation is a promising alternative. This paper proposes a first-of-a-kind approach that relies on training a large language model (LLM) to generate synthetic workload traces, specifically microservice call graphs. To capture complex and arbitrary hierarchical structures and implicit constraints in such traces, we propose to train LLMs to generate recursively, making call graph generation a sequence of more manageable steps. To further enforce learning constraints on the traces and generate uncommon situations, we apply additional instruction tuning steps to align our model with the desired trace features. With this method, we train TraceLLM, an LLM for microservice trace generation, and demonstrate that it produces diverse, realistic traces under varied conditions, outperforming existing approaches in both accuracy and validity. The synthetically generated traces can effectively replace real data to optimize important microservice management tasks. Additionally, TraceLLM adapts to downstream trace-related tasks, such as predicting key trace features and infilling missing data.

cs.SE↗

arXiv2025

OpenThoughts: Data Recipes for Reasoning Models

Reasoning models have made rapid progress on many benchmarks involving math, code, and science. Yet, there are still many open questions about the best training recipes for reasoning since state-of-the-art models often rely on proprietary datasets with little to no public information available. To address this, the goal of the OpenThoughts project is to create open-source datasets for training reasoning models. After initial explorations, our OpenThoughts2-1M dataset led to OpenThinker2-32B, the first model trained on public reasoning data to match DeepSeek-R1-Distill-32B on standard reasoning benchmarks such as AIME and LiveCodeBench. We then improve our dataset further by systematically investigating each step of our data generation pipeline with 1,000+ controlled experiments, which led to OpenThoughts3. Scaling the pipeline to 1.2M examples and using QwQ-32B as teacher yields our OpenThoughts3-7B model, which achieves state-of-the-art results: 53% on AIME 2025, 51% on LiveCodeBench 06/24-01/25, and 54% on GPQA Diamond - improvements of 15.3, 17.2, and 20.5 percentage points compared to the DeepSeek-R1-Distill-Qwen-7B. All of our datasets and models are available on https://openthoughts.ai.

cs.LG↗

arXiv2025

Ambient Diffusion Posterior Sampling: Solving Inverse Problems with Diffusion Models Trained on Corrupted Data

We provide a framework for solving inverse problems with diffusion models learned from linearly corrupted data. Firstly, we extend the Ambient Diffusion framework to enable training directly from measurements corrupted in the Fourier domain. Subsequently, we train diffusion models for MRI with access only to Fourier subsampled multi-coil measurements at acceleration factors R= 2,4,6,8. Secondly, we propose Ambient Diffusion Posterior Sampling (A-DPS), a reconstruction algorithm that leverages generative models pre-trained on one type of corruption (e.g. image inpainting) to perform posterior sampling on measurements from a different forward process (e.g. image blurring). For MRI reconstruction in high acceleration regimes, we observe that A-DPS models trained on subsampled data are better suited to solving inverse problems than models trained on fully sampled data. We also test the efficacy of A-DPS on natural image datasets (CelebA, FFHQ, and AFHQ) and show that A-DPS can sometimes outperform models trained on clean data for several image restoration tasks in both speed and performance.

cs.CV↗

arXiv2025

DataComp-LM: In search of the next generation of training sets for language models

We introduce DataComp for Language Models (DCLM), a testbed for controlled dataset experiments with the goal of improving language models. As part of DCLM, we provide a standardized corpus of 240T tokens extracted from Common Crawl, effective pretraining recipes based on the OpenLM framework, and a broad suite of 53 downstream evaluations. Participants in the DCLM benchmark can experiment with data curation strategies such as deduplication, filtering, and data mixing at model scales ranging from 412M to 7B parameters. As a baseline for DCLM, we conduct extensive experiments and find that model-based filtering is key to assembling a high-quality training set. The resulting dataset, DCLM-Baseline enables training a 7B parameter language model from scratch to 64% 5-shot accuracy on MMLU with 2.6T training tokens. Compared to MAP-Neo, the previous state-of-the-art in open-data language models, DCLM-Baseline represents a 6.6 percentage point improvement on MMLU while being trained with 40% less compute. Our baseline model is also comparable to Mistral-7B-v0.3 and Llama 3 8B on MMLU (63% & 66%), and performs similarly on an average of 53 natural language understanding tasks while being trained with 6.6x less compute than Llama 3 8B. Our results highlight the importance of dataset design for training language models and offer a starting point for further research on data curation.

cs.LG↗

arXiv2025

Geometric Median Matching for Robust k-Subset Selection from Noisy Data

Data pruning -- the combinatorial task of selecting a small and representative subset from a large dataset, is crucial for mitigating the enormous computational costs associated with training data-hungry modern deep learning models at scale. Since large scale data collections are invariably noisy, developing data pruning strategies that remain robust even in the presence of corruption is critical in practice. However, existing data pruning methods often fail under high corruption rates due to their reliance on empirical mean estimation, which is highly sensitive to outliers. In response, we propose Geometric Median (GM) Matching, a novel k-subset selection strategy that leverages Geometric Median -- a robust estimator with an optimal breakdown point of 1/2; to enhance resilience against noisy data. Our method iteratively selects a k-subset such that the mean of the subset approximates the GM of the (potentially) noisy dataset, ensuring robustness even under arbitrary corruption. We provide theoretical guarantees, showing that GM Matching enjoys an improved O(1/k) convergence rate -- a quadratic improvement over random sampling, even under arbitrary corruption. Extensive experiments across image classification and image generation tasks demonstrate that GM Matching consistently outperforms existing pruning approaches, particularly in high-corruption settings and at high pruning rates; making it a strong baseline for robust data pruning.

cs.LG↗

arXiv2024

Which questions should I answer? Salience Prediction of Inquisitive Questions

Inquisitive questions -- open-ended, curiosity-driven questions people ask as they read -- are an integral part of discourse processing (Kehler and Rohde, 2017; Onea, 2016) and comprehension (Prince, 2004). Recent work in NLP has taken advantage of question generation capabilities of LLMs to enhance a wide range of applications. But the space of inquisitive questions is vast: many questions can be evoked from a given context. So which of those should be prioritized to find answers? Linguistic theories, unfortunately, have not yet provided an answer to this question. This paper presents QSALIENCE, a salience predictor of inquisitive questions. QSALIENCE is instruction-tuned over our dataset of linguist-annotated salience scores of 1,766 (context, question) pairs. A question scores high on salience if answering it would greatly enhance the understanding of the text (Van Rooy, 2003). We show that highly salient questions are empirically more likely to be answered in the same article, bridging potential questions (Onea, 2016) with Questions Under Discussion (Roberts, 2012). We further validate our findings by showing that answering salient questions is an indicator of summarization quality in news.

cs.CL↗

arXiv2024

A Survey on Diffusion Models for Inverse Problems

Diffusion models have become increasingly popular for generative modeling due to their ability to generate high-quality samples. This has unlocked exciting new possibilities for solving inverse problems, especially in image restoration and reconstruction, by treating diffusion models as unsupervised priors. This survey provides a comprehensive overview of methods that utilize pre-trained diffusion models to solve inverse problems without requiring further training. We introduce taxonomies to categorize these methods based on both the problems they address and the techniques they employ. We analyze the connections between different approaches, offering insights into their practical implementation and highlighting important considerations. We further discuss specific challenges and potential solutions associated with using latent diffusion models for inverse problems. This work aims to be a valuable resource for those interested in learning about the intersection of diffusion models and inverse problems.

cs.LG↗

arXiv2024

Self-supervised Speech Models for Word-Level Stuttered Speech Detection

Clinical diagnosis of stuttering requires an assessment by a licensed speech-language pathologist. However, this process is time-consuming and requires clinicians with training and experience in stuttering and fluency disorders. Unfortunately, only a small percentage of speech-language pathologists report being comfortable working with individuals who stutter, which is inadequate to accommodate for the 80 million individuals who stutter worldwide. Developing machine learning models for detecting stuttered speech would enable universal and automated screening for stuttering, enabling speech pathologists to identify and follow up with patients who are most likely to be diagnosed with a stuttering speech disorder. Previous research in this area has predominantly focused on utterance-level detection, which is not sufficient for clinical settings where word-level annotation of stuttering is the norm. In this study, we curated a stuttered speech dataset with word-level annotations and introduced a word-level stuttering speech detection model leveraging self-supervised speech models. Our evaluation demonstrates that our model surpasses previous approaches in word-level stuttering speech detection. Additionally, we conducted an extensive ablation analysis of our method, providing insight into the most important aspects of adapting self-supervised speech models for stuttered speech detection.

eess.AS↗

arXiv2024

Consistent Diffusion Meets Tweedie: Training Exact Ambient Diffusion Models with Noisy Data

Ambient diffusion is a recently proposed framework for training diffusion models using corrupted data. Both Ambient Diffusion and alternative SURE-based approaches for learning diffusion models from corrupted data resort to approximations which deteriorate performance. We present the first framework for training diffusion models that provably sample from the uncorrupted distribution given only noisy training data, solving an open problem in this space. Our key technical contribution is a method that uses a double application of Tweedie's formula and a consistency loss function that allows us to extend sampling at noise levels below the observed data noise. We also provide further evidence that diffusion models memorize from their training sets by identifying extremely corrupted images that are almost perfectly reconstructed, raising copyright and privacy concerns. Our method for training using corrupted samples can be used to mitigate this problem. We demonstrate this by fine-tuning Stable Diffusion XL to generate samples from a distribution using only noisy samples. Our framework reduces the amount of memorization of the fine-tuning dataset, while maintaining competitive performance.

cs.CV↗