arXiv subjects

Alexis Bellot

Publications and source records attributed to Alexis Bellot.

At least 19 recordsLinked to original sources

arXiv2026

Foundation Models for Partial Causal Identification

This paper investigates the development of causal foundation models for bounding the effect of interventions and counterfactuals from observational data. We show that a canonical prior can be defined with full support over the space of structural causal models with discrete observables. With this canonical prior, we translate the problem of bounding counterfactuals into that of learning distributions over functions that map data (and possibly structural assumptions) to a causal query of interest. This extends the promising causal foundational modelling paradigm to the estimation of partially-identifiable causal effects, i.e., under unobserved confounding, where multiple values are equally compatible with the observed data and prior structural assumptions.

cs.AI↗

arXiv2026

Two Layers of Instability in Causal Estimation

There is a precise sense in which drawing causal inferences from observational data is hard, even when identifiability is assumed. In particular, Robins and Ritov (1997) and Robins et al. (2003) showed that causal effects can be discontinuous as a function of the data distribution: two arbitrarily close data distributions might correspond to different causal effects. This is a fact independent of the choice of estimator; however, not all estimators are equally unstable. Our contribution is to surface a second layer of instability that depends on the choice of estimator. We show that many standard point estimates can be read as point summaries of multimodal distributions over the space of structural causal models. As such, estimators can jump discontinuously in the data distribution. This defines a taxonomy of estimators that admits a decision-theoretic reading: stability depends on whether the implicit loss function an estimator optimizes is aligned with the causal effect itself. Specifically, inverse propensity weighted estimators and regression estimators are examples of discontinuous summaries, while explicit posterior means and medians are shown to be continuous.

stat.ML↗

arXiv2025

The Limits of Predicting Agents from Behaviour

As the complexity of AI systems and their interactions with the world increases, generating explanations for their behaviour is important for safely deploying AI. For agents, the most natural abstractions for predicting behaviour attribute beliefs, intentions and goals to the system. If an agent behaves as if it has a certain goal or belief, then we can make reasonable predictions about how it will behave in novel situations, including those where comprehensive safety evaluations are untenable. How well can we infer an agent's beliefs from their behaviour, and how reliably can these inferred beliefs predict the agent's behaviour in novel situations? We provide a precise answer to this question under the assumption that the agent's behaviour is guided by a world model. Our contribution is the derivation of novel bounds on the agent's behaviour in new (unseen) deployment environments, which represent a theoretical limit for predicting intentional agents from behavioural data alone. We discuss the implications of these results for several research areas including fairness and safety.

cs.AI↗

arXiv2025

General agents contain world models

Are world models a necessary ingredient for flexible, goal-directed behaviour, or is model-free learning sufficient? We provide a formal answer to this question, showing that any agent capable of generalizing to multi-step goal-directed tasks must have learned a predictive model of its environment. We show that this model can be extracted from the agent's policy, and that increasing the agents performance or the complexity of the goals it can achieve requires learning increasingly accurate world models. This has a number of consequences: from developing safe and general agents, to bounding agent capabilities in complex environments, and providing new algorithms for eliciting world models from agents.

cs.AI↗

arXiv2025

Evaluating the Goal-Directedness of Large Language Models

To what extent do LLMs use their capabilities towards their given goal? We take this as a measure of their goal-directedness. We evaluate goal-directedness on tasks that require information gathering, cognitive effort, and plan execution, where we use subtasks to infer each model's relevant capabilities. Our evaluations of LLMs from Google DeepMind, OpenAI, and Anthropic show that goal-directedness is relatively consistent across tasks, differs from task performance, and is only moderately sensitive to motivational prompts. Notably, most models are not fully goal-directed. We hope our goal-directedness evaluations will enable better monitoring of LLM progress, and enable more deliberate design choices of agentic properties in LLMs.

cs.AI↗

arXiv2025

Partial Transportability for Domain Generalization

A fundamental task in AI is providing performance guarantees for predictions made in unseen domains. In practice, there can be substantial uncertainty about the distribution of new data, and corresponding variability in the performance of existing predictors. Building on the theory of partial identification and transportability, this paper introduces new results for bounding the value of a functional of the target distribution, such as the generalization error of a classifier, given data from source domains and assumptions about the data generating mechanisms, encoded in causal diagrams. Our contribution is to provide the first general estimation technique for transportability problems, adapting existing parameterization schemes such Neural Causal Models to encode the structural constraints necessary for cross-population inference. We demonstrate the expressiveness and consistency of this procedure and further propose a gradient-based optimization scheme for making scalable inferences in practice. Our results are corroborated with experiments.

cs.LG↗

arXiv2024

Mind the Graph When Balancing Data for Fairness or Robustness

Failures of fairness or robustness in machine learning predictive settings can be due to undesired dependencies between covariates, outcomes and auxiliary factors of variation. A common strategy to mitigate these failures is data balancing, which attempts to remove those undesired dependencies. In this work, we define conditions on the training distribution for data balancing to lead to fair or robust models. Our results display that, in many cases, the balanced distribution does not correspond to selectively removing the undesired dependencies in a causal graph of the task, leading to multiple failure modes and even interference with other mitigation techniques such as regularization. Overall, our results highlight the importance of taking the causal graph into account before performing data balancing.

cs.LG↗

arXiv2024

FunBO: Discovering Acquisition Functions for Bayesian Optimization with FunSearch

The sample efficiency of Bayesian optimization algorithms depends on carefully crafted acquisition functions (AFs) guiding the sequential collection of function evaluations. The best-performing AF can vary significantly across optimization problems, often requiring ad-hoc and problem-specific choices. This work tackles the challenge of designing novel AFs that perform well across a variety of experimental settings. Based on FunSearch, a recent work using Large Language Models (LLMs) for discovery in mathematical sciences, we propose FunBO, an LLM-based method that can be used to learn new AFs written in computer code by leveraging access to a limited number of evaluations for a set of objective functions. We provide the analytic expression of all discovered AFs and evaluate them on various global optimization benchmarks and hyperparameter optimization tasks. We show how FunBO identifies AFs that generalize well in and out of the training distribution of functions, thus outperforming established general-purpose AFs and achieving competitive performance against AFs that are customized to specific function types and are learned via transfer-learning algorithms.

cs.LG↗

arXiv2023

Towards Bounding Causal Effects under Markov Equivalence

Predicting the effect of unseen interventions is a fundamental research question across the data sciences. It is well established that in general such questions cannot be answered definitively from observational data. This realization has fuelled a growing literature introducing various identifying assumptions, for example in the form of a causal diagram among relevant variables. In practice, this paradigm is still too rigid for many practical applications as it is generally not possible to confidently delineate the true causal diagram. In this paper, we consider the derivation of bounds on causal effects given only observational data. We propose to take as input a less informative structure known as a Partial Ancestral Graph, which represents a Markov equivalence class of causal diagrams and is learnable from data. In this more ``data-driven'' setting, we provide a systematic algorithm to derive bounds on causal effects that exploit the invariant properties of the equivalence class, and that can be computed analytically. We demonstrate our method with synthetic and real data examples.

stat.ML↗

arXiv2023

Functional Causal Bayesian Optimization

We propose functional causal Bayesian optimization (fCBO), a method for finding interventions that optimize a target variable in a known causal graph. fCBO extends the CBO family of methods to enable functional interventions, which set a variable to be a deterministic function of other variables in the graph. fCBO models the unknown objectives with Gaussian processes whose inputs are defined in a reproducing kernel Hilbert space, thus allowing to compute distances among vector-valued functions. In turn, this enables to sequentially select functions to explore by maximizing an expected improvement acquisition functional while keeping the typical computational tractability of standard BO settings. We introduce graphical criteria that establish when considering functional interventions allows attaining better target effects, and conditions under which selected interventions are also optimal for conditional target effects. We demonstrate the benefits of the method in a synthetic and in a real-world causal graph.

stat.ML↗

arXiv2022

Continuous-Time Modeling of Counterfactual Outcomes Using Neural Controlled Differential Equations

Estimating counterfactual outcomes over time has the potential to unlock personalized healthcare by assisting decision-makers to answer ''what-iF'' questions. Existing causal inference approaches typically consider regular, discrete-time intervals between observations and treatment decisions and hence are unable to naturally model irregularly sampled data, which is the common setting in practice. To handle arbitrary observation patterns, we interpret the data as samples from an underlying continuous-time process and propose to model its latent trajectory explicitly using the mathematics of controlled differential equations. This leads to a new approach, the Treatment Effect Neural Controlled Differential Equation (TE-CDE), that allows the potential outcomes to be evaluated at any time point. In addition, adversarial training is used to adjust for time-dependent confounding which is critical in longitudinal settings and is an added challenge not encountered in conventional time-series. To assess solutions to this problem, we propose a controllable simulation environment based on a model of tumor growth for a range of scenarios with irregular sampling reflective of a variety of clinical scenarios. TE-CDE consistently outperforms existing approaches in all simulated scenarios with irregular sampling.

cs.LG↗

arXiv2022

Generalization bounds and algorithms for estimating conditional average treatment effect of dosage

We investigate the task of estimating the conditional average causal effect of treatment-dosage pairs from a combination of observational data and assumptions on the causal relationships in the underlying system. This has been a longstanding challenge for fields of study such as epidemiology or economics that require a treatment-dosage pair to make decisions but may not be able to run randomized trials to precisely quantify their effect and heterogeneity across individuals. In this paper, we extend (Shalit et al, 2017) to give new bounds on the counterfactual generalization error in the context of a continuous dosage parameter which relies on a different approach to defining counterfactuals and assignment bias adjustment. This result then guides the definition of new learning objectives that can be used to train representation learning algorithms for which we show empirically new state-of-the-art performance results across several benchmark datasets for this problem, including in comparison to doubly-robust estimation methods.

cs.LG↗

arXiv2021

MIRACLE: Causally-Aware Imputation via Learning Missing Data Mechanisms

Missing data is an important problem in machine learning practice. Starting from the premise that imputation methods should preserve the causal structure of the data, we develop a regularization scheme that encourages any baseline imputation method to be causally consistent with the underlying data generating mechanism. Our proposal is a causally-aware imputation algorithm (MIRACLE). MIRACLE iteratively refines the imputation of a baseline by simultaneously modeling the missingness generating mechanism, encouraging imputation to be consistent with the causal structure of the data. We conduct extensive experiments on synthetic and a variety of publicly available datasets to show that MIRACLE is able to consistently improve imputation over a variety of benchmark methods across all three missingness scenarios: at random, completely at random, and not at random.

cs.LG↗

arXiv2021

Neural graphical modelling in continuous-time: consistency guarantees and algorithms

The discovery of structure from time series data is a key problem in fields of study working with complex systems. Most identifiability results and learning algorithms assume the underlying dynamics to be discrete in time. Comparatively few, in contrast, explicitly define dependencies in infinitesimal intervals of time, independently of the scale of observation and of the regularity of sampling. In this paper, we consider score-based structure learning for the study of dynamical systems. We prove that for vector fields parameterized in a large class of neural networks, least squares optimization with adaptive regularization schemes consistently recovers directed graphs of local independencies in systems of stochastic differential equations. Using this insight, we propose a score-based learning algorithm based on penalized Neural Ordinary Differential Equations (modelling the mean process) that we show to be applicable to the general setting of irregularly-sampled multivariate time series and to outperform the state of the art across a range of dynamical systems.

stat.ML↗

arXiv2021

Deconfounded Score Method: Scoring DAGs with Dense Unobserved Confounding

Unobserved confounding is one of the greatest challenges for causal discovery. The case in which unobserved variables have a widespread effect on many of the observed ones is particularly difficult because most pairs of variables are conditionally dependent given any other subset, rendering the causal effect unidentifiable. In this paper we show that beyond conditional independencies, under the principle of independent mechanisms, unobserved confounding in this setting leaves a statistical footprint in the observed data distribution that allows for disentangling spurious and causal effects. Using this insight, we demonstrate that a sparse linear Gaussian directed acyclic graph among observed variables may be recovered approximately and propose an adjusted score-based causal discovery algorithm that may be implemented with general purpose solvers and scales to high-dimensional problems. We find, in addition, that despite the conditions we pose to guarantee causal recovery, performance in practice is robust to large deviations in model assumptions.

stat.ML↗

arXiv2021

Policy Analysis using Synthetic Controls in Continuous-Time

Counterfactual estimation using synthetic controls is one of the most successful recent methodological developments in causal inference. Despite its popularity, the current description only considers time series aligned across units and synthetic controls expressed as linear combinations of observed control units. We propose a continuous-time alternative that models the latent counterfactual path explicitly using the formalism of controlled differential equations. This model is directly applicable to the general setting of irregularly-aligned multivariate time series and may be optimized in rich function spaces -- thereby improving on some limitations of existing approaches.

stat.ML↗

arXiv2020

Accounting for Unobserved Confounding in Domain Generalization

This paper investigates the problem of learning robust, generalizable prediction models from a combination of multiple datasets and qualitative assumptions about the underlying data-generating model. Part of the challenge of learning robust models lies in the influence of unobserved confounders that void many of the invariances and principles of minimum error presently used for this problem. Our approach is to define a different invariance property of causal solutions in the presence of unobserved confounders which, through a relaxation of this invariance, can be connected with an explicit distributionally robust optimization problem over a set of affine combination of data distributions. Concretely, our objective takes the form of a standard loss, plus a regularization term that encourages partial equality of error derivatives with respect to model parameters. We demonstrate the empirical performance of our approach on healthcare data from different modalities, including image, speech and tabular data.

stat.ML↗

arXiv2020

Learning Overlapping Representations for the Estimation of Individualized Treatment Effects

The choice of making an intervention depends on its potential benefit or harm in comparison to alternatives. Estimating the likely outcome of alternatives from observational data is a challenging problem as all outcomes are never observed, and selection bias precludes the direct comparison of differently intervened groups. Despite their empirical success, we show that algorithms that learn domain-invariant representations of inputs (on which to make predictions) are often inappropriate, and develop generalization bounds that demonstrate the dependence on domain overlap and highlight the need for invertible latent maps. Based on these results, we develop a deep kernel regression algorithm and posterior regularization framework that substantially outperforms the state-of-the-art on a variety of benchmarks data sets.

stat.ML↗