arXiv subjects

Ali Pinar

Publications and source records attributed to Ali Pinar.

43 records · Page 3Linked to original sources

arXiv2011

The Similarity between Stochastic Kronecker and Chung-Lu Graph Models

The analysis of massive graphs is now becoming a very important part of science and industrial research. This has led to the construction of a large variety of graph models, each with their own advantages. The Stochastic Kronecker Graph (SKG) model has been chosen by the Graph500 steering committee to create supercomputer benchmarks for graph algorithms. The major reasons for this are its easy parallelization and ability to mirror real data. Although SKG is easy to implement, there is little understanding of the properties and behavior of this model. We show that the parallel variant of the edge-configuration model given by Chung and Lu (referred to as CL) is notably similar to the SKG model. The graph properties of an SKG are extremely close to those of a CL graph generated with the appropriate parameters. Indeed, the final probability matrix used by SKG is almost identical to that of a CL model. This implies that the graph distribution represented by SKG is almost the same as that given by a CL model. We also show that when it comes to fitting real data, CL performs as well as SKG based on empirical studies of graph properties. CL has the added benefit of a trivially simple fitting procedure and exactly matching the degree distribution. Our results suggest that users of the SKG model should consider the CL model because of its similar properties, simpler structure, and ability to fit a wider range of degree distributions. At the very least, CL is a good control model to compare against.

cs.SI↗

arXiv2011

On Clustering on Graphs with Multiple Edge Types

We study clustering on graphs with multiple edge types. Our main motivation is that similarities between objects can be measured in many different metrics. For instance similarity between two papers can be based on common authors, where they are published, keyword similarity, citations, etc. As such, graphs with multiple edges is a more accurate model to describe similarities between objects. Each edge/metric provides only partial information about the data; recovering full information requires aggregation of all the similarity metrics. Clustering becomes much more challenging in this context, since in addition to the difficulties of the traditional clustering problem, we have to deal with a space of clusterings. We generalize the concept of clustering in single-edge graphs to multi-edged graphs and investigate problems such as: Can we find a clustering that remains good, even if we change the relative weights of metrics? How can we describe the space of clusterings efficiently? Can we find unexpected clusterings (a good clustering that is distant from all given clusterings)? If given the ground-truth clustering, can we recover how the weights for edge types were aggregated? %In this paper, we discuss these problems and the underlying algorithmic challenges and propose some solutions. We also present two case studies: one based on papers on Arxiv and one based on CIA World Factbook.

cs.SI↗

arXiv2011

An Implicit Optimization Approach for Survivable Network Design

We consider the problem of designing a network of minimum cost while satisfying a prescribed survivability criterion. The survivability criterion requires that a feasible flow must still exists (i.e. all demands can be satisfied without violating arc capacities) even after the disruption of a subset of the network's arcs. Specifically, we consider the case in which a disruption (random or malicious) can destroy a subset of the arcs, with the cost of the disruption not to exceed a disruption budget. This problem takes the form of a tri-level, two-player game, in which the network operator designs (or augments) the network, then the attacker launches a disruption that destroys a subset of arcs, and then the network operator attempts to find a feasible flow over the residual network. We first show how this can be modeled as a two-stage stochastic program from the network operator's perspective, with each of the exponential number of potential attacks considered as a disruption scenario. We then reformulate this problem, via a Benders decomposition, to consider the recourse decisions implicitly, greatly reducing the number of variables but at the expense of an exponential increase in the number of constraints. We next develop a cut-generation based algorithm. Rather than \emph{explicitly} considering each disruption scenario to identify these Benders cuts, however, we develop a bi-level program and corresponding separation algorithm that enables us to \emph{implicitly} evaluate the exponential set of disruption scenarios. Our computational results demonstrate the efficacy of this approach.

math.OC↗

arXiv2011

Constructing and Sampling Graphs with a Prescribed Joint Degree Distribution

One of the most influential recent results in network analysis is that many natural networks exhibit a power-law or log-normal degree distribution. This has inspired numerous generative models that match this property. However, more recent work has shown that while these generative models do have the right degree distribution, they are not good models for real life networks due to their differences on other important metrics like conductance. We believe this is, in part, because many of these real-world networks have very different joint degree distributions, i.e. the probability that a randomly selected edge will be between nodes of degree k and l. Assortativity is a sufficient statistic of the joint degree distribution, and it has been previously noted that social networks tend to be assortative, while biological and technological networks tend to be disassortative. We suggest understanding the relationship between network structure and the joint degree distribution of graphs is an interesting avenue of further research. An important tool for such studies are algorithms that can generate random instances of graphs with the same joint degree distribution. This is the main topic of this paper and we study the problem from both a theoretical and practical perspective. We provide an algorithm for constructing simple graphs from a given joint degree distribution, and a Monte Carlo Markov Chain method for sampling them. We also show that the state space of simple graphs with a fixed degree distribution is connected via end point switches. We empirically evaluate the mixing time of this Markov Chain by using experiments based on the autocorrelation of each edge. These experiments show that our Markov Chain mixes quickly on real graphs, allowing for utilization of our techniques in practice.

cs.DS↗

arXiv2011

Computing an Aggregate Edge-Weight Function for Clustering Graphs with Multiple Edge Types

We investigate the community detection problem on graphs in the existence of multiple edge types. Our main motivation is that similarity between objects can be defined by many different metrics and aggregation of these metrics into a single one poses several important challenges, such as recovering this aggregation function from ground-truth, investigating the space of different clusterings, etc. In this paper, we address how to find an aggregation function to generate a composite metric that best resonates with the ground-truth. We describe two approaches: solving an inverse problem where we try to find parameters that generate a graph whose clustering gives the ground-truth clustering, and choosing parameters to maximize the quality of the ground-truth clustering. We present experimental results on real and synthetic benchmarks.

cs.SI↗

arXiv2011

Hypergraph Partitioning through Vertex Separators on Graphs

The modeling flexibility provided by hypergraphs has drawn a lot of interest from the combinatorial scientific community, leading to novel models and algorithms, their applications, and development of associated tools. Hypergraphs are now a standard tool in combinatorial scientific computing. The modeling flexibility of hypergraphs however, comes at a cost: algorithms on hypergraphs are inherently more complicated than those on graphs, which sometimes translate to nontrivial increases in processing times. Neither the modeling flexibility of hypergraphs, nor the runtime efficiency of graph algorithms can be overlooked. Therefore, the new research thrust should be how to cleverly trade-off between the two. This work addresses one method for this trade-off by solving the hypergraph partitioning problem by finding vertex separators on graphs. Specifically, we investigate how to solve the hypergraph partitioning problem by seeking a vertex separator on its net intersection graph (NIG), where each net of the hypergraph is represented by a vertex, and two vertices share an edge if their nets have a common vertex. We propose a vertex-weighting scheme to attain good node-balanced hypergraphs, since NIG model cannot preserve node balancing information. Vertex-removal and vertex-splitting techniques are described to optimize cutnet and connectivity metrics, respectively, under the recursive bipartitioning paradigm. We also developed an implementation for our GPVS-based HP formulations by adopting and modifying a state-of-the-art GPVS tool onmetis. Experiments conducted on a large collection of sparse matrices confirmed the validity of our proposed techniques.

cs.DS↗

arXiv2011

A Linear Approximation Algorithm for 2-Dimensional Vector Packing

We study the 2-dimensional vector packing problem, which is a generalization of the classical bin packing problem where each item has 2 distinct weights and each bin has 2 corresponding capacities. The goal is to group items into minimum number of bins, without violating the bin capacity constraints. We propose a Θ}(n)-time approximation algorithm that is inspired by the O(n^2) algorithm proposed by Chang, Hwang, and Park.

cs.DS↗