arXiv subjects

Ali Soltanmanesh

Publications and source records attributed to Ali Soltanmanesh.

8 recordsLinked to original sources

arXiv2026

Influence of Oscillating Magnetic Fields on the Electric Dipole Moment of Radical Pairs in Cryptochrome Based Magnetoreception

Radical pairs induced by light-driven reduction of cryptochrome protein constitute a spin dependent mechanism that is accompanied by an electric dipole moment and is found to be sensitive to external magnetic fields. In this research, to investigate for the further proof of such model, the simultaneous effect of the Earth's static magnetic field and the time-dependent magnetic field noise on the electric dipole moment of the radical pair has been studied within the quantum mechanical framework. The effect of the external magnetic field discussed in different angles regarding the Earth magnetic field within various frequencies and magnitudes. The sensitivity of the system behavior to the external magnetic field frequencies and magnitudes, vastly differs among the changes in the magnetic field angle to the Earth's static field. Furthermore, the sensitivity studied under the effect of the environmental noise. The relative spatial orientation of the two magnetic field components plays an important role in the time evolution of the electric dipole moment. Also, deeper discussions on specific relative orientations of the external magnetic fields, such as 24 degree, shows that the quantum model of radical pairs which is based on dipole moment, is in agreement with the results of the birds behavorial studies. These findings provide new insights into the sensitivity of the radical pair model to the combination of magnetic fields and may contribute to a comprehensive understanding of the phenomenon of magnetoreception and the advancement of bioinspired magnetic sensors.

physics.bio-ph↗

arXiv2025

Quantum modeling of radical pair magnetic sensor based on electric dipole moment

Photoreduction of cryptochrome protein in the retina is a well-known mechanism of navigation of birds through the geomagnetic field, yet the biosignal nature of the mechanism remains unclear. The absorption of blue light by the flavin adenine dinucleotide (FAD) chromophore can alter the distribution of electrons in cryptochrome and create radical pairs with separated charges. In this study, the spin dynamics of electrons in the radical pair including its spin-orbit coupling were investigated by quantum mechanical modeling. Spin-orbit coupling is negligible relative to other terms and has no significant role in the dynamics. However, it engages the spatial states of the radical pair and make possible to study spatial related observables. Several interactions were considered in the presence of an external magnetic field, and the resulting electric dipole moment in cryptochrome was computed as the quantity emerging from this coupling. The computations show the induced electric dipole moment clearly depend on the characteristics of the applied magnetic field even after considering dissipative effects. In fact, our findings indicate that the radical pair in cryptochrome protein is a magnetic biosensor, in the sense that in the presence of the geomagnetic field, variations in spin states can influence its electric dipole moment, which may be interpreted via the bird as an orientation signal. The results can be used in the advancement of bio-inspired technologies which replicate animal magnetic sensitivity.

physics.bio-ph↗

arXiv2023

Mimicking Classical Noise in Ion Channels by Quantum Decoherence

The mechanism of selectivity in ion channels is still an open question in biology. According to recent proposals, it seems that the selectivity filter of the ion channel, which plays a key role in the channel's function, may show quantum coherence, which can play a role in explaining the selection mechanism and conduction of ions. However, due to decoherence theory, the presence of environmental noise causes decoherence and loss of quantum effects. Sometimes we hope that the effect of calssical noise of the environment in ion channels can be modeled through a picture whose the quantum decoherence theory presents. In this paper, we simulated the behavior of the ion channel system in the Spin-Boson model using the unitary evolution of a stochastic Hamiltonian operator under the classical noise model. Also, in a different approach, we modeled the system evolution as a two-level Spin-Boson model with tunneling interacting with a bath of harmonic oscillators, using decoherence theory. The results of this system were discussed in different classical and quantum regimes. By examining the results it was found that the Spin-Boson model at a high hopping rate of Potassium ions can simulate the behavior of the system in the classical noise approach. This result is another proof for the fact that ion channels need high speed for high selectivity.

quant-ph↗

arXiv2022

Quantum coherence on selectivity and transport of ion channels

Recently, it has been suggested that ion channel selectivity filter may exhibit quantum coherence, which may be appropriate to explain ion selection and conduction processes. Potassium channels play a vital role in many physiological processes. One of their main physiological functions is the efficient and highly selective transfer of K+ ions through the membranes into the cells. To do this, ion channels must be highly selective, allowing only certain ions to pass through the membrane, while preventing the others. The present research is an attempt to investigate the relationship between hopping rate and maintaining coherence in ion channels. Using the Lindblad equation to describe a three-level system, the results in different quantum regimes are examined. We studied the distillable coherence and the second order coherence function of the system. The oscillation of distillable coherence from zero, after the decoherence time, and also the behavior of the coherence function clearly show the point that the system is coherent in ion channels with high throughput rates.

quant-ph↗

arXiv2020

Can Thermodynamic Behavior of Alice's Particle Affect Bob's Particle?

We propose an experiment to investigate the possibility of long-distance thermodynamic relationships between two entangled particles. We consider a pair of spin 1/2 particles prepared in an entangled singlet state in which one particle is sent to Alice and the other to her distant mate Bob, who are spatially separated. Our proposed experiment consists of three different setups: First, both particles are coupled to two heat baths with various temperatures. In the second setup, only Alice's particle is coupled to a heat bath and finally, in the last setup, only Bob's particle is coupled to a heat bath. We study the evolution of an open quantum system using the first law of thermodynamics based on the concepts of ergotropy, adiabatic work, and operational heat, in a quantum fashion. We analyze and compare ergotropy and heat transfer in three setups. Our results show that the heat transfer for each entangled particle is not independent of the thermalization process that occurs for the other one. We prove that the existence of quantum correlations affects the thermodynamic behavior of distant particles in an entangled state.

quant-ph↗

arXiv2019

Determination of classical behaviour of the Earth for large quantum numbers using quantum guiding equation

For quantum systems, we expect to see the classical behaviour at the limit of large quantum numbers. Hence, we apply Bohmian approach for describing the evolution of Earth around the Sun. We obtain possible trajectories of the Earth system with different initial conditions which converge to a certain stable orbit, known as the Kepler orbit, after a given time. The trajectories are resulted from the guiding equation $p=\nabla S$ in the Bohmian mechanics, which relates the momentum of the system to the phase part of the wave function. Except at some special situations, Bohmian trajectories are not Newtonian in character. We show that the classic behaviour of the Earth can be interpreted as the consequence of the guiding equation at the limit of large quantum numbers.

quant-ph↗

arXiv2019

Clausius inequality versus quantum coherence

In this study, we model a harmonic oscillator that enters an interferometer partially coupled to a thermal bath of oscillatory fields by employing a Brownian-type Lindblad master equation. More specifically, we investigate the dynamics and the variations of the thermodynamic quantities of the system at different temperatures. We recognize that although the system can remain coherent during its interaction with the thermal bath in the low-temperature limit, the system's entropy production violates the Clausius inequality. Furthermore, we argue that the system's coherence is the source of this violation, rather than the entanglement degree of system-environment, as reported in previous studies.

quant-ph↗

arXiv2018

Can thermal quantum Gibbs states approve as quantum equilibrium states?

In this study, we investigate a quantum harmonic oscillator interacting with a thermal bath of oscillatory fields in a quantum circuit. By solving the Lindblad master equation, we calculate the resulting interference pattern from measuring the system in the momentum space. Interestingly, we show that even if one considers the decoherence effect, the system will keep some of its quantum properties. Indeed, the equilibration does not completely leave the system in a Gibbs state, and the system remains coherent. Moreover we discuss the requirements of a process that can be called a thermalization. We show that in our system, the quantum thermodynamic equilibration process cannot be considered a thermalization. Also, we discussed that a Lindblad system-bath interaction cannot be explained by a thermalization process. Such an effect strongly can be detected when the frequency of the central system is high and the temperature is low. Then, by introducing an entropy measure, we show that although the system is in maximum entropy, the equilibrium state is far from the Gibbs state.

quant-ph↗