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Alice Chevaux

Publications and source records attributed to Alice Chevaux.

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Credible rectangles for high-dimensional posterior comparison

We propose a Bayesian framework for uncertainty quantification and comparison in brain connectivity graph analysis. Standard graph-based approaches typically rely on point estimates of correlation matrices, overlooking the uncertainty induced by high-dimensional estimation from limited data. Our methodology constructs and compares credible hyperrectangles derived from posterior distributions, providing interpretable tools for subject-level inference and longitudinal monitoring. We develop scalable algorithms for estimating these regions in high dimensions and establish theoretical guarantees in the inverse-Wishart model for resting-state fMRI data, including a Bernstein--von Mises theorem for correlation matrices and control of a Bayesian family-wise error rate. The proposed framework enables principled detection of significant connectivity differences both globally and locally while preserving joint dependency structures. While demonstrating competitive performance against multiple-testing procedures on synthetic datasets, our approach also facilitates the direct comparison of two distinct scans from a single patient, a capability currently absent from the literature. We leverage this novelty on real datasets to improve interpretability. Beyond fMRI data, the approach provides a general framework for comparison problems in high-dimensional dependent settings.

stat.ME

Prior elicitation for Bayesian estimation of single-subject connectivity networks

Inference of brain functional connectivity networks from resting-state fMRI data is a key focus in neuroimaging. This paper introduces new Bayesian approaches for inferring a functional connectivity graph from multivariate resting-state fMRI time series of a single subject. Our methods rely on novel Bayesian priors on correlation matrices and a dedicated prior elicitation framework, which translates prior beliefs about the expected level and variability of correlations into interpretable hyperparameter choices, enabling the construction of expert-informed priors. When combined with a Gaussian likelihood, these priors also exhibit computational advantages. Compared to most existing methods for this problem that estimate constant weights, our model provides distributional weights defined by the posterior distributions for the connectivity graph, yielding more robust point estimates through the regularizing effect of expert-informed priors, evaluating uncertainty, and enabling a range of post-inference analyses. In particular, we derive a procedure for identifying significant connectivities based on posterior distributions of weights and credible sets. To the best of our knowledge, only one existing Bayesian functional connectivity model is applicable to single-subject resting-state fMRI data, making our approach a valuable addition to the field and demonstrating superior performance in our experiments.

stat.ME

Benchmarking Brain Connectivity Graph Inference: A Novel Validation Approach

Inferring a binary connectivity graph from resting-state fMRI data for a single subject requires making several methodological choices and assumptions that can significantly affect the results. In this study, we investigate the robustness of existing edge detection methods when relaxing a common assumption: the sparsity of the graph. We propose a new pipeline to generate synthetic data and to benchmark the state of the art in graph inference. Simulated correlation matrices are designed to have a set of given zeros and a constraint on the signal-to-noise ratio. We compare approaches based on covariance or precision matrices, emphasizing their implications for connectivity inference. This framework allows us to assess the sensitivity of connectivity estimations and edge detection methods to different parameters.

stat.ME