arXiv subjects

Alireza Vafaei Sadr

Publications and source records attributed to Alireza Vafaei Sadr.

10 recordsLinked to original sources

arXiv2025

Clusternets: A deep learning approach to probe clustering dark energy

Machine Learning (ML) algorithms are becoming popular in cosmology for extracting valuable information from cosmological data. In this paper, we evaluate the performance of a Convolutional Neural Network (CNN) trained on matter density snapshots to distinguish clustering Dark Energy (DE) from the cosmological constant scenario and to detect the speed of sound ($c_s$) associated with clustering DE. We compare the CNN results with those from a Random Forest (RF) algorithm trained on power spectra. Varying the dark energy equation of state parameter $w_{\rm{DE}}$ within the range of -0.7 to -0.99, while keeping $c_s^2 = 1$, we find that the CNN approach results in a significant improvement in accuracy over the RF algorithm. The improvement in classification accuracy can be as high as $40\%$ depending on the physical scales involved. We also investigate the ML algorithms' ability to detect the impact of the speed of sound by choosing $c_s^2$ from the set $\{1, 10^{-2}, 10^{-4}, 10^{-7}\}$ while maintaining a constant $w_{\rm DE}$ for three different cases: $w_{\rm DE} \in \{-0.7, -0.8, -0.9\}$. Our results suggest that distinguishing between various values of $c_s^2$ and the case where $c_s^2=1$ is challenging, particularly at small scales and when $w_{\rm{DE}}\approx -1$. However, as we consider larger scales, the accuracy of $c_s^2$ detection improves. Notably, the CNN algorithm consistently outperforms the RF algorithm, leading to an approximate $20\%$ enhancement in $c_s^2$ detection accuracy in some cases.

astro-ph.CO↗

arXiv2022

U-Net-based Models for Skin Lesion Segmentation: More Attention and Augmentation

According to WHO[1], since the 1970s, diagnosis of melanoma skin cancer has been more frequent. However, if detected early, the 5-year survival rate for melanoma can increase to 99 percent. In this regard, skin lesion segmentation can be pivotal in monitoring and treatment planning. In this work, ten models and four augmentation configurations are trained on the ISIC 2016 dataset. The performance and overfitting are compared utilizing five metrics. Our results show that the U-Net-Resnet50 and the R2U-Net have the highest metrics value, along with two data augmentation scenarios. We also investigate CBAM and AG blocks in the U-Net architecture, which enhances segmentation performance at a meager computational cost. In addition, we propose using pyramid, AG, and CBAM blocks in a sequence, which significantly surpasses the results of using the two individually. Finally, our experiments show that models that have exploited attention modules successfully overcome common skin lesion segmentation problems. Lastly, in the spirit of reproducible research, we implement models and codes publicly available.

eess.IV↗

arXiv2022

Learning to Detect Interesting Anomalies

Anomaly detection algorithms are typically applied to static, unchanging, data features hand-crafted by the user. But how does a user systematically craft good features for anomalies that have never been seen? Here we couple deep learning with active learning -- in which an Oracle iteratively labels small amounts of data selected algorithmically over a series of rounds -- to automatically and dynamically improve the data features for efficient outlier detection. This approach, AHUNT, shows excellent performance on MNIST, CIFAR10, and Galaxy-DESI data, significantly outperforming both standard anomaly detection and active learning algorithms with static feature spaces. Beyond improved performance, AHUNT also allows the number of anomaly classes to grow organically in response to Oracle's evaluations. Extensive ablation studies explore the impact of Oracle question selection strategy and loss function on performance. We illustrate how the dynamic anomaly class taxonomy represents another step towards fully personalized rankings of different anomaly classes that reflect a user's interests, allowing the algorithm to learn to ignore statistically significant but uninteresting outliers (e.g., noise). This should prove useful in the era of massive astronomical datasets serving diverse sets of users who can only review a tiny subset of the incoming data.

cs.LG↗

arXiv2022

Recommendations on test datasets for evaluating AI solutions in pathology

Artificial intelligence (AI) solutions that automatically extract information from digital histology images have shown great promise for improving pathological diagnosis. Prior to routine use, it is important to evaluate their predictive performance and obtain regulatory approval. This assessment requires appropriate test datasets. However, compiling such datasets is challenging and specific recommendations are missing. A committee of various stakeholders, including commercial AI developers, pathologists, and researchers, discussed key aspects and conducted extensive literature reviews on test datasets in pathology. Here, we summarize the results and derive general recommendations for the collection of test datasets. We address several questions: Which and how many images are needed? How to deal with low-prevalence subsets? How can potential bias be detected? How should datasets be reported? What are the regulatory requirements in different countries? The recommendations are intended to help AI developers demonstrate the utility of their products and to help regulatory agencies and end users verify reported performance measures. Further research is needed to formulate criteria for sufficiently representative test datasets so that AI solutions can operate with less user intervention and better support diagnostic workflows in the future.

eess.IV↗

arXiv2022

The Hydrogen Intensity and Real-time Analysis eXperiment: 256-Element Array Status and Overview

The Hydrogen Intensity and Real-time Analysis eXperiment (HIRAX) is a radio interferometer array currently in development, with an initial 256-element array to be deployed at the South African Radio Astronomy Observatory (SARAO) Square Kilometer Array (SKA) site in South Africa. Each of the 6m, $f/0.23$ dishes will be instrumented with dual-polarisation feeds operating over a frequency range of 400-800 MHz. Through intensity mapping of the 21 cm emission line of neutral hydrogen, HIRAX will provide a cosmological survey of the distribution of large-scale structure over the redshift range of $0.775 < z < 2.55$ over $\sim$15,000 square degrees of the southern sky. The statistical power of such a survey is sufficient to produce $\sim$7 percent constraints on the dark energy equation of state parameter when combined with measurements from the Planck satellite. Additionally, HIRAX will provide a highly competitive platform for radio transient and HI absorber science while enabling a multitude of cross-correlation studies. In this paper, we describe the science goals of the experiment, overview of the design and status of the sub-components of the telescope system, and describe the expected performance of the initial 256-element array as well as the planned future expansion to the final, 1024-element array.

astro-ph.IM↗

arXiv2021

Design and implementation of a noise temperature measurement system for the Hydrogen Intensity and Real-time Analysis eXperiment (HIRAX)

This paper describes the design, implementation, and verification of a test-bed for determining the noise temperature of radio antennas operating between 400-800MHz. The requirements for this test-bed were driven by the HIRAX experiment, which uses antennas with embedded amplification, making system noise characterization difficult in the laboratory. The test-bed consists of two large cylindrical cavities, each containing radio-frequency (RF) absorber held at different temperatures (300K and 77K), allowing a measurement of system noise temperature through the well-known 'Y-factor' method. The apparatus has been constructed at Yale, and over the course of the past year has undergone detailed verification measurements. To date, three preliminary noise temperature measurement sets have been conducted using the system, putting us on track to make the first noise temperature measurements of the HIRAX feed and perform the first analysis of feed repeatability.

astro-ph.IM↗

arXiv2020

Deep Learning improves identification of Radio Frequency Interference

Flagging of Radio Frequency Interference (RFI) is an increasingly important challenge in radio astronomy. We present R-Net, a deep convolutional ResNet architecture that significantly outperforms existing algorithms -- including the default MeerKAT RFI flagger, and deep U-Net architectures -- across all metrics including AUC, F1-score and MCC. We demonstrate the robustness of this improvement on both single dish and interferometric simulations and, using transfer learning, on real data. Our R-Net model's precision is approximately $90\%$ better than the current MeerKAT flagger at $80\%$ recall and has a 35\% higher F1-score with no additional performance cost. We further highlight the effectiveness of transfer learning from a model initially trained on simulated MeerKAT data and fine-tuned on real, human-flagged, KAT-7 data. Despite the wide differences in the nature of the two telescope arrays, the model achieves an AUC of 0.91, while the best model without transfer learning only reaches an AUC of 0.67. We consider the use of phase information in our models but find that without calibration the phase adds almost no extra information relative to amplitude data only. Our results strongly suggest that deep learning on simulations, boosted by transfer learning on real data, will likely play a key role in the future of RFI flagging of radio astronomy data.

astro-ph.IM↗

arXiv2020

Inpainting via Generative Adversarial Networks for CMB data analysis

In this work, we propose a new method to inpaint the CMB signal in regions masked out following a point source extraction process. We adopt a modified Generative Adversarial Network (GAN) and compare different combinations of internal (hyper-)parameters and training strategies. We study the performance using a suitable $\mathcal{C}_r$ variable in order to estimate the performance regarding the CMB power spectrum recovery. We consider a test set where one point source is masked out in each sky patch with a 1.83 $\times$ 1.83 squared degree extension, which, in our gridding, corresponds to 64 $\times$ 64 pixels. The GAN is optimized for estimating performance on Planck 2018 total intensity simulations. The training makes the GAN effective in reconstructing a masking corresponding to about 1500 pixels with $1\%$ error down to angular scales corresponding to about 5 arcminutes.

astro-ph.CO↗

arXiv2019

A Flexible Framework for Anomaly Detection via Dimensionality Reduction

Anomaly detection is challenging, especially for large datasets in high dimensions. Here we explore a general anomaly detection framework based on dimensionality reduction and unsupervised clustering. We release DRAMA, a general python package that implements the general framework with a wide range of built-in options. We test DRAMA on a wide variety of simulated and real datasets, in up to 3000 dimensions, and find it robust and highly competitive with commonly-used anomaly detection algorithms, especially in high dimensions. The flexibility of the DRAMA framework allows for significant optimization once some examples of anomalies are available, making it ideal for online anomaly detection, active learning and highly unbalanced datasets.

cs.LG↗

arXiv2017

Primordial anisotropies from cosmic strings during inflation

In this work we study the imprints of a primordial cosmic string on inflationary power spectrum. Cosmic string induces two distinct contributions on curvature perturbations power spectrum. The first type of correction respects the translation invariance while violating isotropy. This generates quadrupolar statistical anisotropy in CMB maps which is constrained by the Planck data. The second contribution breaks both homogeneity and isotropy, generating a dipolar power asymmetry in variance of temperature fluctuations with its amplitude falling on small scales. We show that the strongest constraint on the tension of string is obtained from the quadrupolar anisotropy and argue that the mass scale of underlying theory responsible for the formation of string can not be much higher than the GUT scale. The predictions of string for the diagonal and off-diagonal components of CMB angular power spectrum are presented.

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