arXiv subjects

Almaz Khabibrakhmanov

Publications and source records attributed to Almaz Khabibrakhmanov.

4 recordsLinked to original sources

arXiv2026

MBD-ML: Many-body dispersion from machine learning for molecules and materials

Van der Waals (vdW) interactions are essential for describing molecules and materials, from drug design and catalysis to battery applications. These omnipresent interactions must also be accurately included in machine-learned force fields. The many-body dispersion (MBD) method stands out as one of the most accurate and transferable approaches to capture vdW interactions, requiring only atomic $C_6$ coefficients and polarizabilities as input. We present MBD-ML, a pretrained message passing neural network that predicts these atomic properties directly from atomic structures. Through seamless integration with libMBD, our method enables the immediate calculation of MBD-inclusive total energies, forces, and stress tensors. By eliminating the need for intermediate electronic structure calculations, MBD-ML offers a practical and streamlined tool that simplifies the incorporation of state-of-the-art vdW interactions into any electronic structure code, as well as empirical and machine-learned force fields.

physics.chem-ph↗

arXiv2023

Universal Pairwise Interatomic van der Waals Potentials Based on Quantum Drude Oscillators

Repulsive short-range and attractive long-range van der Waals (vdW) forces have an appreciable role in the behavior of extended molecular systems. When using empirical force fields - the most popular computational methods applied to such systems - vdW forces are typically described by Lennard-Jones-like potentials, which unfortunately have a limited predictive power. Here, we present a universal parameterization of a quantum-mechanical vdW potential, which requires only two free-atom properties - the static dipole polarizability $α_1$ and the dipole-dipole $C_6$ dispersion coefficient. This is achieved by deriving the functional form of the potential from the quantum Drude oscillator (QDO) model, employing scaling laws for the equilibrium distance and the binding energy as well as applying the microscopic law of corresponding states. The vdW-QDO potential is shown to be accurate for vdW binding energy curves, as demonstrated by comparing to ab initio binding curves of 21 noble-gas dimers. The functional form of the vdW-QDO potential has the correct asymptotic behavior both at zero and infinite distances. In addition, it is shown that the damped vdW-QDO potential can accurately describe vdW interactions in dimers consisting of group II elements. Finally, we demonstrate the applicability of the atom-in-molecule vdW-QDO model for predicting accurate dispersion energies for molecular systems. The present work makes an important step towards constructing universal vdW potentials, which could benefit (bio)molecular computational studies.

physics.chem-ph↗

arXiv2022

Optimized Quantum Drude Oscillators for Atomic and Molecular Response Properties

The quantum Drude oscillator (QDO) is an efficient yet accurate coarse-grained approach that has been widely used to model electronic and optical response properties of atoms and molecules, as well as polarization and dispersion interactions between them. Three effective parameters (frequency, mass, charge) fully characterize the QDO Hamiltonian and are adjusted to reproduce response properties. However, the soaring success of coupled QDOs for many-atom systems remains fundamentally unexplained and the optimal mapping between atoms/molecules and oscillators has not been established. Here, we present an optimized parametrization (OQDO) where the parameters are fixed by using only dipolar properties. For the periodic table of elements as well as small molecules, our OQDO model accurately reproduces atomic (spatial) polarization potentials and multipolar dispersion coefficients, elucidating the high promise of the presented model in the development of next-generation quantum-mechanical force fields for (bio)molecular simulations.

physics.chem-ph↗

arXiv2020

Carbon on the nanoscale: Ultrastiffness and unambiguous definition of incompressibility

In the presented work, the features of mechanical stiffness of carbon nanoparticles (nanodiamonds and fullerenes) in a wide range of sizes are considered. The enhancement of nanodiamonds stiffness (comparing to bulk diamond) is studied and explained in the terms of average bond stiffness $k_0$. It is shown that $k_0$ can be useful in the description of various carbon nanostructures and gives reliable estimates of their incompressibility. Moreover, we found that $k_0$ can be well estimated based only on relaxed atomic geometry.

cond-mat.mtrl-sci↗