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Alper Gungor

Publications and source records attributed to Alper Gungor.

3 recordsLinked to original sources

Learning Fourier-Constrained Diffusion Bridges for MRI Reconstruction

Deep generative models have gained recent traction in accelerated MRI reconstruction. Diffusion priors are particularly promising given their representational fidelity. Instead of the target transformation from undersampled to fully-sampled data required for MRI reconstruction, common diffusion priors are trained to learn a task-agnostic transformation from an asymptotic start-point of Gaussian noise onto the finite end-point of fully-sampled data. During inference, data-consistency projections are injected in between reverse diffusion steps to reach a compromise solution within the span of both the trained diffusion prior and the imaging operator for an accelerated MRI acquisition. Unfortunately, performance losses can occur due to the discrepancy between target and learned transformations given the asymptotic normality assumption in diffusion priors. To address this discrepancy, here we introduce a novel Fourier-constrained diffusion bridge (FDB) for MRI reconstruction that transforms between a finite start-point of moderately undersampled data and an end-point of fully-sampled data. We derive the theoretical formulation of FDB as a generalized diffusion process based on a stochastic degradation operator that performs random spatial-frequency removal. We propose an enhanced sampling algorithm with a learned correction term for soft dealiasing across reverse diffusion steps. Demonstrations on brain MRI indicate that FDB outperforms state-of-the-art methods including non-diffusion and diffusion priors.

eess.IV

Comments on "Deep Neural Networks with Random Gaussian Weights: A Universal Classification Strategy?"

In a recently published paper [1], it is shown that deep neural networks (DNNs) with random Gaussian weights preserve the metric structure of the data, with the property that the distance shrinks more when the angle between the two data points is smaller. We agree that the random projection setup considered in [1] preserves distances with a high probability. But as far as we are concerned, the relation between the angle of the data points and the output distances is quite the opposite, i.e., smaller angles result in a weaker distance shrinkage. This leads us to conclude that Theorem 3 and Figure 5 in [1] are not accurate. Hence the usage of random Gaussian weights in DNNs cannot provide an ability of universal classification or treating in-class and out-of-class data separately. Consequently, the behavior of networks consisting of random Gaussian weights only is not useful to explain how DNNs achieve state-of-art results in a large variety of problems.

stat.ML

Statistically Segregated k-Space Sampling for Accelerating Multiple-Acquisition MRI

A central limitation of multiple-acquisition magnetic resonance imaging (MRI) is the degradation in scan efficiency as the number of distinct datasets grows. Sparse recovery techniques can alleviate this limitation via randomly undersampled acquisitions. A frequent sampling strategy is to prescribe for each acquisition a different random pattern drawn from a common sampling density. However, naive random patterns often contain gaps or clusters across the acquisition dimension that in turn can degrade reconstruction quality or reduce scan efficiency. To address this problem, a statistically-segregated sampling method is proposed for multiple-acquisition MRI. This method generates multiple patterns sequentially, while adaptively modifying the sampling density to minimize k-space overlap across patterns. As a result, it improves incoherence across acquisitions while still maintaining similar sampling density across the radial dimension of k-space. Comprehensive simulations and in vivo results are presented for phase-cycled balanced steady-state free precession and multi-echo T$_2$-weighted imaging. Segregated sampling achieves significantly improved quality in both Fourier and compressed-sensing reconstructions of multiple-acquisition datasets.

eess.IV